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ProbBreed

Probability Theory for Selecting Candidates in Plant Breeding

v1.0.4.9 · Dec 15, 2025 · AGPL (>= 3)

Description

Use probability theory under the Bayesian framework for calculating the risk of selecting candidates in a multi-environment context. Contained are functions used to fit a Bayesian multi-environment model (based on the available presets), extract posterior values and maximum posterior values, compute the variance components, check the model’s convergence, and calculate the probabilities. For both across and within-environments scopes, the package computes the probability of superior performance and the pairwise probability of superior performance. Furthermore, the probability of superior stability and the pairwise probability of superior stability across environments is estimated. A joint probability of superior performance and stability is also provided.

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CRAN Check Status

13 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 222.5Mb
  sub-directories of 1Mb or more:
    libs  221.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 234.5Mb
  sub-directories of 1Mb or more:
    libs  233.2Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is 14.8Mb
  sub-directories of 1Mb or more:
    libs  13.6Mb
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
ERROR r-devel-windows-x86_64

whether package can be installed

Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.6/ProbBreed.Rcheck/00install.out' for details.
NOTE r-oldrel-macos-arm64

installed package size

installed size is 222.5Mb
  sub-directories of 1Mb or more:
    libs  221.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 234.5Mb
  sub-directories of 1Mb or more:
    libs  233.2Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is 14.8Mb
  sub-directories of 1Mb or more:
    libs  13.6Mb
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 222.5Mb
  sub-directories of 1Mb or more:
    libs  221.3Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 234.5Mb
  sub-directories of 1Mb or more:
    libs  233.2Mb
NOTE r-oldrel-windows-x86_64

installed package size

installed size is 14.8Mb
  sub-directories of 1Mb or more:
    libs  13.6Mb

Dependency Network

Dependencies Reverse dependencies ggplot2 lifecycle Rcpp RcppParallel rlang rstan rstantools ProbBreed

Version History

15 tracked
new 1.0.4.9 Mar 10, 2026
updated 1.0.4.9 ← 1.0.4.6 diff Dec 14, 2025
updated 1.0.4.6 ← 1.0.4.5 diff Mar 16, 2025
updated 1.0.4.5 ← 1.0.4.4 diff Feb 2, 2025
updated 1.0.4.4 ← 1.0.4.3 diff Nov 10, 2024
updated 1.0.4.3 ← 1.0.4.2 diff Nov 6, 2024
updated 1.0.4.2 ← 1.0.4.1 diff Aug 27, 2024
updated 1.0.4.1 ← 1.0.4.0 diff Jul 25, 2024
updated 1.0.4.0 ← 1.0.3.2 diff Jul 16, 2024
updated 1.0.3.2 ← 1.0.3.1 diff Apr 4, 2024
updated 1.0.3.1 ← 1.0.3 diff Nov 28, 2023
updated 1.0.3 ← 1.0.2 diff Oct 2, 2023
updated 1.0.2 ← 1.0.1 diff Jul 6, 2023
updated 1.0.1 ← 1.0.0 diff Jun 25, 2023
new 1.0.0 Jun 19, 2023