ProbBreed
Probability Theory for Selecting Candidates in Plant Breeding
Description
Use probability theory under the Bayesian framework for calculating the risk of selecting candidates in a multi-environment context. Contained are functions used to fit a Bayesian multi-environment model (based on the available presets), extract posterior values and maximum posterior values, compute the variance components, check the model’s convergence, and calculate the probabilities. For both across and within-environments scopes, the package computes the probability of superior performance and the pairwise probability of superior performance. Furthermore, the probability of superior stability and the pairwise probability of superior stability across environments is estimated. A joint probability of superior performance and stability is also provided.
Downloads
381
Last 30 days
11414th
760
Last 90 days
3.1K
Last year
Trend: +180.2% (30d vs prior 30d)
24
Last 30 days
128
Last 90 days
433
Last year
Trend: -40% (30d vs prior 30d)
2
Last 7 days
15
Last 30 days
1
All-time
autoCRAN-only: this name is served only by autoCRAN, so the count is exact.
CRAN Check Status
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 22, 2026
installed package size
installed size is 222.5Mb
sub-directories of 1Mb or more:
libs 221.3Mb
installed package size
installed size is 234.5Mb
sub-directories of 1Mb or more:
libs 233.2Mb
installed package size
installed size is 14.8Mb
sub-directories of 1Mb or more:
libs 13.6Mb
ERROR 10 OK · 3 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Apr 18, 2026
whether package can be installed
Installation failed. See 'd:/Rcompile/CRANpkg/local/4.6/ProbBreed.Rcheck/00install.out' for details.
installed package size
installed size is 222.5Mb
sub-directories of 1Mb or more:
libs 221.3Mb
installed package size
installed size is 234.5Mb
sub-directories of 1Mb or more:
libs 233.2Mb
installed package size
installed size is 14.8Mb
sub-directories of 1Mb or more:
libs 13.6Mb
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 222.5Mb
sub-directories of 1Mb or more:
libs 221.3Mb
installed package size
installed size is 234.5Mb
sub-directories of 1Mb or more:
libs 233.2Mb
installed package size
installed size is 14.8Mb
sub-directories of 1Mb or more:
libs 13.6Mb
Code
Structure
Lines of code
30,634
Files
107
Compiled share
82.6%
Has compiled src
Yes
Language breakdown
API
Exported functions
4
Internal functions
5
Recent export changes
Testing & CI
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Return-value doc rate
100%
\dontrun example ratio
100%
Roxygen coverage
100%
Has pkgdown
No
NEWS present
Yes
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
40%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.5.0
System requirements
1
C++ standard
C++17
License
AGPL (>= 3)
License flags
SPDX valid, OSI approved
History
Versions
14
First release
2023-06-20
Latest release
2025-12-15
Avg cadence
57 days
Cold removal rate
100%
Dep drift
6
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.