PlasmaMutationDetector
Tumor Mutation Detection in Plasma
v1.7.2
·
Jun 11, 2018
·
MIT + file LICENSE
Description
Aims at detecting single nucleotide variation (SNV) and insertion/deletion (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor, at each base position of an Next Generation Sequencing (NGS) analysis. Mutations are assessed by comparing the minor-allele frequency at each position to the measured PER in control samples.
Downloads
228
Last 30 days
20062nd
695
Last 90 days
2.5K
Last year
Trend: -8.1% (30d vs prior 30d)
CRAN Check Status
2
NOTE
12
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | NOTE |
| r-devel-linux-x86_64-debian-gcc | NOTE |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (2 non-OK)
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Yves Rozenholc <yves.rozenholc@parisdescartes.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Yves",
family = "Rozenholc",
role = c("aut", "cre"),
email = "yves.rozenholc@parisdescartes.fr"),
person(given = "Nicolas",
family = "Pécuchet",
role = "aut"),
person(given = "Pierre",
family = "Laurent-Puig",
role = "aut"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Yves Rozenholc <yves.rozenholc@parisdescartes.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Yves",
family = "Rozenholc",
role = c("aut", "cre"),
email = "yves.rozenholc@parisdescartes.fr"),
person(given = "Nicolas",
family = "Pécuchet",
role = "aut"),
person(given = "Pierre",
family = "Laurent-Puig",
role = "aut"))
as necessary.
Check History
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-devel-linux-x86_64-debian-clang
CRAN incoming feasibility
Maintainer: ‘Yves Rozenholc <yves.rozenholc@parisdescartes.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Yves",
family = "Rozenholc",
role = c("aut", "cre
...[truncated]...
person(given = "Nicolas",
family = "Pécuchet",
role = "aut"),
person(given = "Pierre",
family = "Laurent-Puig",
role = "aut"))
as necessary.
NOTE
r-devel-linux-x86_64-debian-gcc
CRAN incoming feasibility
Maintainer: ‘Yves Rozenholc <yves.rozenholc@parisdescartes.fr>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Yves",
family = "Rozenholc",
role = c("aut", "cre
...[truncated]...
person(given = "Nicolas",
family = "Pécuchet",
role = "aut"),
person(given = "Pierre",
family = "Laurent-Puig",
role = "aut"))
as necessary.