PhylogeneticEM
Automatic Shift Detection using a Phylogenetic EM
v1.8.1
·
Sep 23, 2025
·
GPL (>= 2) | file LICENSE
Description
Implementation of the automatic shift detection method for Brownian Motion (BM) or Ornstein–Uhlenbeck (OU) models of trait evolution on phylogenies. Some tools to handle equivalent shifts configurations are also available. See Bastide et al. (2017) <doi:10.1111/rssb.12206> and Bastide et al. (2018) <doi:10.1093/sysbio/syy005>.
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| Flavor | Status |
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| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
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installed package size
installed size is 5.1Mb
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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE
r-oldrel-macos-arm64
installed package size
installed size is 5.1Mb
sub-directories of 1Mb or more:
libs 3.6Mb
NOTE
r-oldrel-macos-x86_64
installed package size
installed size is 5.2Mb
sub-directories of 1Mb or more:
libs 3.6Mb
Dependency Network
Version History
new
1.8.1
Mar 10, 2026
new
1.0.0
Jan 30, 2017