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PhySortR

A Fast, Flexible Tool for Sorting Phylogenetic Trees

v1.0.9 · Feb 12, 2025 · GPL (>= 3)

Description

Screens and sorts phylogenetic trees in both traditional and extended Newick format. Allows for the fast and flexible screening (within a tree) of Exclusive clades that comprise only the target taxa and/or Non- Exclusive clades that includes a defined portion of non-target taxa.

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CRAN Check Status

14 OK
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Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies phytools ape PhySortR

Version History

new 1.0.9 Mar 10, 2026
updated 1.0.9 ← 1.0.8 diff Feb 12, 2025
updated 1.0.8 ← 1.0.7 diff Aug 5, 2018
updated 1.0.7 ← 1.0.6 diff May 15, 2016
updated 1.0.6 ← 1.0.5 diff Mar 22, 2016
updated 1.0.5 ← 1.0.3 diff Jan 10, 2016
updated 1.0.3 ← 1.0.2 diff Dec 20, 2015
new 1.0.2 Dec 15, 2015