R Observatory: Metrics for PermuteNGS version 1.0.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2010-05-12. Its history is shown below.

Details below reflect version 1.0.3, its last release before removal.

PermuteNGS

1.0.3Package record

PermuteNGS

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Taeheon LeeCRAN page ↗

PermuteNGS: The significance testing of transcriptome profiling for RNA-sequencing data

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/PermuteNGS/PermuteNGS_1.0.3.tar.gz"
pkgFile <- "PermuteNGS_1.0.3.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.3) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.3

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 2
Examples that run: 100%1 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 0%
Help pages citing references: 100%

How these are measured

Downloads

PermuteNGS Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

How downloads are counted

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (1)

qvalue

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (4)

Contributor

Contributor

Contributor

Contributor

Maintainer since 1.0.1 (2010)

Releases (3)

Pick two releases to compare their code metrics.

R
R 2.12.0 released · 2010-10-15
1.0.3
record
2010-05-12 · diff ↗
1.0.3archived
2010-05-12 · diff ↗
1.0.2
record
2010-05-11 · diff ↗
1.0.1
record
2010-05-06
R
R 2.11.0 released · 2010-04-22

Package metadata

First published: 2010-05-06
Total releases: 3 / 16 yrs
License: LGPL-3 OSI
Bundled data: 10 KB / 1 file

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("PermuteNGS")

Format

Lee, T., Lee, B., Oh, H., & Kim, H. (n.d.). PermuteNGS: PermuteNGS (Version 1.0.3) [Computer software]. Retrieved October 26, 2026, from https://CRAN.R-project.org/package=PermuteNGS

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for PermuteNGS version 1.0.3 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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