PTXQC
Quality Report Generation for MaxQuant and mzTab Results
Description
Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool). Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format. Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) <doi:10.1021/acs.jproteome.5b00780>.
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CRAN Check Status
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | NOTE |
| r-oldrel-macos-x86_64 | NOTE |
| r-oldrel-windows-x86_64 | NOTE |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (3 non-OK)
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb
Check History
NOTE 11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb
installed package size
installed size is 7.9Mb
sub-directories of 1Mb or more:
doc 4.0Mb
examples 2.6Mb