R Observatory: Metrics for PSor version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

PSor

0.1.0Package record

Semiparametric Principal Stratification Analysis Beyond Monotonicity

0packages depend

1.8Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Jiaqi TongCRAN page ↗GitHub ↗Issues ↗

Estimates principal causal effects under principal stratification using a margin-free, conditional odds ratio sensitivity parameter. This framework unifies the monotonicity assumption and the counterfactual intermediate independence assumption, allowing for robust analysis when monotonicity may not hold. Computes point estimates, standard errors, and confidence intervals for conditionally doubly robust and debiased machine learning estimators. The methodological details are described in Tong, Kahan, Harhay, and Li (2025) doi:10.48550/arXiv.2501.17514.

Changes in 0.1.0

CRAN resubmission

Revised the Description field in DESCRIPTION to cite the methodological reference in CRAN-recommended form with authors, year, and DOI.
Removed unnecessary \dontrun{} and \donttest{} wrappers where feasible.
Reduced example sizes so package examples run during checking.
Refined documentation and examples in response to CRAN reviewer comments.

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("PSor", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("deckardt98/PSor")

Development version from deckardt98/PSor. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-psor

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-PSor

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-PSor

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 3.0 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-09-08
ERROR12 OK, 1 ERROR2026-09-07
OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-06-09

Show 2 earlier changesHide 2 earlier changes

ERROR12 OK, 1 ERROR2026-06-08
OK5 OK2026-04-25

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.0

READMEYes · 399 wordsVignettesNoNEWSYes · 67% structured · mentions 0.1.0Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 2 (1 internal)
Examples that run: 100%1 run in a plain check
Exported functions with examples: 50%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

1.8K

CRAN downloads in the past year

Rank #17,548 · ~5/day · ~153/mo

Releases R versions

Daily download trend is not available in this view yet.

25530 days

73090 days

1.8K1 year

Compare downloads with other packages →

Also on32 r2u2 autocran

How downloads are counted

Repository

deckardt98/psor ↗Account: deckardt98

0Stars

0Forks

0Open issues

0Open PRs

0Releases

causal-inferencedebiased-machine-learningdoubly-robust-estimationmanuscript-codeprincipal-stratificationrr-packageresearch-software

Last activity 2026-09-30

Responsiveness

not measured

How these are measured

PracticesBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/deckardt98/psor on 2026-10-21.

Continuous integration (1)

GitHub Actions

Docs source (1)

README.Rmd

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

9 external dependencies (excludes base and recommended)

Installing PSor adds 81 packages (45 with compiled code, 65 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (0)

none

Imports (7)

statsSuperLearner caret dplyr geex magrittr numDeriv

LinkingTo (0)

none

Suggests (3)

testthat knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (4)

Jiaqi Tong

Author, Maintainer since 0.1.0 (2026)

Michael O. Harhay

Contributor

Brennan Kahan

Contributor

Fan Li

Contributor

Releases (1)

0.1.0Latest
record
2026-04-24 · current release
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-04-24
Total releases: 1 / 1 yrs
License: MIT + file LICENSE OSI
Download size: 16 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("PSor")

Format

Tong, J., Harhay, M. O., Kahan, B., & Li, F. (2026). PSor: Semiparametric Principal Stratification Analysis Beyond Monotonicity (Version 0.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.PSor

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for PSor version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-10-23. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-23, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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