R Observatory: Metrics for PSCN version 1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2012-10-29. Its history is shown below.

Details below reflect version 1.0, its last release before removal.

PSCN

1.0

Parent Specific DNA Copy Number Estimation

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Hao Chen1 releasesCRAN page ↗

This package estimate parent specific DNA copy number for human genomes using high-density SNP arrays data, that is, the data has two component, logR and B-allele frequency.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/PSCN/PSCN_1.0.tar.gz"
pkgFile <- "PSCN_1.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

1

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 11%

Downloads

PSCN Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (2)

R >= 2.10.0MASS

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Other (3)

Hao Chen

Contributor

Haipeng Xing

Contributor

and Nancy R. Zhang

Contributor

Package Timeline

1 release. R releases are shown for context.

1.0archived
2012-10-29
R
R 2.13.0 released · 2011-04-13
1.0
2011-03-28
R
R 2.12.0 released · 2010-10-15

Package metadata

Total releases: 1
License: GPL (>= 2) OSI
Minimum R: ≥ 2.10.0
Bundled data: 2.7 MB / 6 files
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("PSCN")

Format

Chen, H., Xing, H., & Zhang, a. N. R. (n.d.). PSCN: Parent Specific DNA Copy Number Estimation (Version 1.0) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=PSCN

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for PSCN version 1.0 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →