POSTm
Phylogeny-Guided OTU-Specific Association Test for Microbiome Data
v1.4
·
Apr 17, 2024
·
GPL-2
Description
Implements the Phylogeny-Guided Microbiome OTU-Specific Association Test method, which boosts the testing power by adaptively borrowing information from phylogenetically close OTUs (operational taxonomic units) of the target OTU. This method is built on a kernel machine regression framework and allows for flexible modeling of complex microbiome effects, adjustments for covariates, and can accommodate both continuous and binary outcomes.
Downloads
CRAN
263
Last 30 days
15777th
732
Last 90 days
2.7K
Last year
Trend: +45.3% (30d vs prior 30d)
r2u
CRAN
9
Last 30 days
25
Last 90 days
118
Last year
Trend: -43.8% (30d vs prior 30d)
CRAN Check Status
13
OK
Show all 13 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | OK |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check History
OK 12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Apr 25, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'POSTm_vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `cd68707c92ed76e1ca1aaef4120d6f9941e8e0d5.pdf' not found: using draft setting. Error: processing vignette 'POSTm_vignette.Rmd' ...[truncated]... rg/tinytex/r/#debugging for debugging tips. See POSTm_vignette.log for more info. --- failed re-building 'POSTm_vignette.Rmd' SUMMARY: processing the following file failed: 'POSTm_vignette.Rmd' Error: Vignette re-building failed. Execution halted