POSTm
Phylogeny-Guided OTU-Specific Association Test for Microbiome Data
v1.4
·
Apr 17, 2024
·
GPL-2
Description
Implements the Phylogeny-Guided Microbiome OTU-Specific Association Test method, which boosts the testing power by adaptively borrowing information from phylogenetically close OTUs (operational taxonomic units) of the target OTU. This method is built on a kernel machine regression framework and allows for flexible modeling of complex microbiome effects, adjustments for covariates, and can accommodate both continuous and binary outcomes.
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CRAN Check Status
1
ERROR
13
OK
Show all 14 flavors
| Flavor | Status |
|---|---|
| r-devel-linux-x86_64-debian-clang | OK |
| r-devel-linux-x86_64-debian-gcc | OK |
| r-devel-linux-x86_64-fedora-clang | OK |
| r-devel-linux-x86_64-fedora-gcc | OK |
| r-devel-macos-arm64 | OK |
| r-devel-windows-x86_64 | OK |
| r-oldrel-macos-arm64 | OK |
| r-oldrel-macos-x86_64 | OK |
| r-oldrel-windows-x86_64 | ERROR |
| r-patched-linux-x86_64 | OK |
| r-release-linux-x86_64 | OK |
| r-release-macos-arm64 | OK |
| r-release-macos-x86_64 | OK |
| r-release-windows-x86_64 | OK |
Check details (1 non-OK)
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'POSTm_vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `cd68707c92ed76e1ca1aaef4120d6f9941e8e0d5.pdf' not found: using draft setting. Error: processing vignette 'POSTm_vignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/POSTm.Rcheck/vign_test/POSTm/vignettes/POSTm_vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See POSTm_vignette.log for more info. --- failed re-building 'POSTm_vignette.Rmd' SUMMARY: processing the following file failed: 'POSTm_vignette.Rmd' Error: Vignette re-building failed. Execution halted
Check History
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
ERROR
r-oldrel-windows-x86_64
re-building of vignette outputs
Error(s) in re-building vignettes: --- re-building 'POSTm_vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `cd68707c92ed76e1ca1aaef4120d6f9941e8e0d5.pdf' not found: using draft setting. Error: processing vignette 'POSTm_vignette.Rmd' ...[truncated]... rg/tinytex/r/#debugging for debugging tips. See POSTm_vignette.log for more info. --- failed re-building 'POSTm_vignette.Rmd' SUMMARY: processing the following file failed: 'POSTm_vignette.Rmd' Error: Vignette re-building failed. Execution halted