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PAC

Partition-Assisted Clustering and Multiple Alignments of Networks

v1.1.6 · Dec 15, 2025 · GPL-3
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Description

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) <doi:10.1371/journal.pcbi.1005875> for detail method description.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies Rcpp igraph parmigene infotheo dplyr Rtsne ggplot2 ggrepel PAC

Version History

new 1.1.6 Mar 10, 2026
updated 1.1.6 ← 1.1.4 diff Dec 15, 2025
updated 1.1.4 ← 1.1.3 diff Feb 17, 2021
updated 1.1.3 ← 1.1.2 diff Dec 13, 2020
updated 1.1.2 ← 1.1.1 diff Mar 19, 2020
updated 1.1.1 ← 1.1.0 diff Jan 2, 2019
updated 1.1.0 ← 1.0.10 diff Oct 8, 2018
updated 1.0.10 ← 1.0.9 diff Mar 5, 2018
updated 1.0.9 ← 1.0.8 diff Aug 15, 2017
updated 1.0.8 ← 1.0.7 diff Apr 29, 2017
updated 1.0.7 ← 1.0.6 diff Mar 9, 2017
updated 1.0.6 ← 1.0.5 diff Jan 22, 2017
updated 1.0.5 ← 1.0.3 diff Apr 9, 2016
updated 1.0.2 ← 1.0.1 diff Mar 28, 2016
updated 1.0.3 ← 1.0.2 diff Mar 28, 2016
updated 1.0.1 ← 1.0.0 diff Mar 26, 2016
new 1.0.0 Mar 24, 2016