Skip to content
Filter by outcome

Compare versions · code and quality diff

OncoBayes2

Minor bump
Released 2025-12-18 → 2026-08-04229 days apartMaintained by Sebastian Weber
Structure
Exported functions ⓘ28→28no change
Internal functions ⓘ106→113+7
Total lines ⓘ27,004→27,263+259
R lines ⓘ7,822→8,003+181
Compiled (src) lines ⓘ6,927→6,927no change
Test lines ⓘ7,678→7,754+76
Files changed (57 files)+2023−1515
DESCRIPTION+10−10
MD5+55−52
NAMESPACE+1−3
NEWS.md+23
R/OncoBayes2-package.R+1−2
R/blrm_exnex.R+86−135
R/blrm_trial.R+1−1
R/diagnostics.R+34−4
R/draws_backend.R+209
R/nsamples.R+4−4
R/plot_blrm.R+71−45
R/posterior.R+22−53
R/posterior_interval.R+1−1
R/pp_data.R+2−5
R/sysdata.rda
ⓘLines added and removed per file, summed across the versions between the two compared releases.
Datasets~3
changed (3)
calibration_datapkg_create_datepkg_sha
ⓘDatasets are matched by name; a content-fingerprint change means the stored data itself changed (a format change means only its storage encoding did). 6 unchanged.
Languages
R functions ⓘ116→123+7
C++ functions ⓘ6→6no change
C functions ⓘ8→8no change
Fortran functions ⓘ0→0no change
Rust functions ⓘ0→0no change
Compiled share ⓘ25.7%→25.4%−0.2pp
Documentation
Doc lines ⓘ3,220→3,155−65
Roxygen coverage ⓘ100%→100%no change
References coverage ⓘ25.6%→26.3%+0.7pp
Examples coverage ⓘ71.8%→73.7%+1.9pp
Help pages with examples ⓘ28→28no change
Undocumented params lower is better ⓘ13%→13%no change
Value docs ⓘ82.4%→82.4%no change
pkgdown site ⓘNo→Nono change
README ⓘNo→Nono change
Vignettes ⓘYes→Yesno change
NEWS file ⓘYes→Yesno change
Testing
Test cases ⓘ160→162+2
Test/code ratio ⓘ0.98→0.97−0.01
Snapshot tests ⓘ0→0no change
Has tests ⓘYes→Yesno change
Exported fn test linkage ⓘ89.3%→89.3%no change
Stochastic seed discipline ⓘ100%→100%no change
Complexity
Cyclomatic mean lower is better ⓘ4.11→4.06−0.06
Cyclomatic max lower is better ⓘ84→85+1
Cyclomatic median lower is better ⓘ2→2no change
Lines per function (mean) lower is better ⓘ47.74→46.55−1.19
Call graph
Functions (nodes) ⓘ116→123+7
Call edges ⓘ123→132+9
Max function degree ⓘ23→23no change
Mean function degree ⓘ2.12→2.15+0.03
Isolated functions ⓘ17→18+1
Connected components ⓘ4→4no change
Native call sites ⓘ2→2no change
Object system
S3 methods ⓘ49→49no change
S4 classes ⓘ0→0no change
S4 generics ⓘ0→0no change
S4 methods ⓘ0→0no change
R6 classes ⓘ0→0no change
S7 classes ⓘ0→0no change
RC classes ⓘ0→0no change
Quality & risk
Unsafe pattern score lower is better ⓘ6→6no change
Secret pattern count lower is better ⓘ0→0no change
Global-state write density lower is better ⓘ0.13→0.25+0.12
Deprecated idiom density lower is better ⓘ0.38→0.37−0.01
Triple-colon uses lower is better ⓘ1→1no change
Continuous integration
CI present ⓘNo→Nono change
CI matrix breadth ⓘ0→0no change
Dependencies+3−3
Direct dependencies lower is better ⓘ25→23−2
Dependency drift ⓘ–→17–
DependsNo change
Imports+Rdpack−ggplot2−scales−brms
Suggests+ggplot2+scales
LinkingToNo change
ⓘPackage sets are compared per dependency type from the DESCRIPTION of each version. Version constraints and the base R requirement are omitted.
Requirements
System requirements ⓘ4→4no change
SPDX valid ⓘYes→Yesno change
OSI approved ⓘYes→Yesno change
People
Authors5→5no change
Release metadata
Package
OncoBayes2
Version
0.9-4→0.10-0
Released
2025-12-18→2026-08-04
Maintainer
Sebastian Weber
License
GPL (>= 3)
Requires R
3.5.0
Download size
532 KB

66 comparison rows · 8 improved, 4 regressed, 2 added, 0 removed, 52 unchanged. Hover any metric for its definition, or see the full glossary.

Privacy choices

These apply to this browser and are stored on this device only. Nothing about your choice is sent to us.

Read the privacy policy