R Observatory: Metrics for OhdsiReportGenerator version 2.3.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

OhdsiReportGenerator

2.3.1

Observational Health Data Sciences and Informatics Report Generator

0packages depend

5Kdownloads / year

87.2%test coverage

13/13checks pass

Overview

About

Maintained by Jenna RepsFirst published 2025-02-267 releasesCRAN page ↗GitHub ↗

Extract results into R from the Observational Health Data Sciences and Informatics result database (see https://ohdsi.github.io/Strategus/results-schema/index.html) and generate reports/presentations via 'quarto' that summarize results in HTML format. Learn more about 'OhdsiReportGenerator' at https://ohdsi.github.io/OhdsiReportGenerator/.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("OhdsiReportGenerator", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("OHDSI/OhdsiReportGenerator")

Development version from OHDSI/OhdsiReportGenerator. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-ohdsireportgenerator

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-OhdsiReportGenerator

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-OhdsiReportGenerator

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 4.6 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.24

87.2%

Coverage · measured lines

100%

Documentation · exports

16

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-12
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 4 earlier snapshots

WARNING2026-05-11
12 OK · 0 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE
OK2026-04-06
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-04
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 99%
Return-value docs: 96%
References docs: 0%

Downloads

5K

CRAN downloads in the past year

Rank #5,345 · ~14/day · ~413/mo

Releases R versions

Daily download trend is not available in this view yet.

30030 days

1.5K90 days

5K1 year

Compare downloads with other packages →

Also on202 r2u

Repository

GitHub ↗ ohdsi/ohdsireportgenerator

1Stars

5Forks

1Open issues

1Open PRs

7Releases

200Commits

6Contributors

200 commits · Last activity 2026-08-06

Forks over time

2025-04-14 · 12026-07-07 · 5

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/ohdsi/ohdsireportgenerator on 2026-08-09.

Continuous integration (1)

GitHub Actions

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (16)

CirceR DatabaseConnector forestploter dplyr ggplot2grDevicesgridgt gtExtras kableExtra ParallelLogger quarto rlang rmarkdown SqlRender tidyr

LinkingTo (0)

none

Suggests (6)

htmltools knitr markdown ResultModelManager RSQLite testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (2)

Maintainer (1)

Jenna Reps

Author, Maintainer

Authors (2)

Jenna Reps

Author, Maintainer

Anthony Sena

Author

Package Timeline

7 releases. Pick two to compare their code metrics. R releases are shown for context.

2.3.1Latest
2026-08-03 · current release · diff ↗
2.2.0
2026-05-17 · diff ↗
R
R 4.6.0 released · 2026-04-24
2.1.0
2026-03-25 · diff ↗
2.0.2
2025-12-18 · diff ↗
1.1.1
2025-05-22 · diff ↗
1.1.0
2025-05-07 · diff ↗
R
R 4.5.0 released · 2025-04-11
1.0.1
2025-02-26
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2025-02-26
Total releases: 7 / 1 yrs
License: Apache License 2.0 OSI
Minimum R: ≥ 4.1.0
Download size: 2.1 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("OhdsiReportGenerator")

Format

Reps, J., & Sena, A. (2026). OhdsiReportGenerator: Observational Health Data Sciences and Informatics Report Generator (Version 2.3.1) [Computer software]. https://doi.org/10.32614/CRAN.package.OhdsiReportGenerator

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for OhdsiReportGenerator version 2.3.1 [Data set]. HJJB, LLC. Data release v2026-08-15. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-15, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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