R Observatory: Metrics for NeMo version 1.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2011-08-23. Its history is shown below.

Details below reflect version 1.0.1, its last release before removal.

NeMo

1.0.1

Exceptionnal Network Motifs in biological networks

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

2 releasesCRAN page ↗

NeMo package aims to extract motifs which are occur more frequently than expected in random, in a given network. The method used doesn't require any Monte-Carlo based simulations. The number of motif occurences is compared (p-value calculation) with well-suited count distribution (compound Poisson distribution)

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/NeMo/NeMo_1.0.1.tar.gz"
pkgFile <- "NeMo_1.0.1.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.0.1) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

0

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 86%
References docs: 56%

Downloads

NeMo Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.5.0

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (5)

Other (5)

Contributor

Contributor

Contributor

Contributor

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 2.14.0 released · 2011-10-31
1.0.1
2011-08-23 · diff ↗
1.0.1archived
2011-08-23 · diff ↗
1.0
2011-08-22
R
R 2.13.0 released · 2011-04-13

Package metadata

Total releases: 2
License: GPL (>= 2) OSI
Minimum R: ≥ 2.5.0
Bundled data: 0.3 KB / 1 file
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("NeMo")

Format

Robin, S., Birmele, E., Grasseau, G., Koskas, M., & Schbath, S. (n.d.). NeMo: Exceptionnal Network Motifs in biological networks (Version 1.0.1) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=NeMo

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for NeMo version 1.0.1 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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