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InterSIM

Simulation of Inter-Related Genomic Datasets

v2.3.0 · Jan 10, 2025 · GPL

Description

Generates three inter-related genomic datasets: methylation, gene expression and protein expression having user specified cluster patterns. The simulation utilizes the realistic inter- and intra- relationships from real DNA methylation, mRNA expression and protein expression data from the TCGA ovarian cancer study, Chalise (2016) <doi:10.1016/j.cmpb.2016.02.011>.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Reverse Dependencies (2)

depends

imports

Dependency Network

Dependencies Reverse dependencies MASS NMF IntNMF M3JF InterSIM

Version History

new 2.3.0 Mar 10, 2026
updated 2.3.0 ← 2.2.0 diff Jan 10, 2025
updated 2.2.0 ← 2.1 diff Jul 15, 2018
updated 2.1 ← 2.0 diff Jul 29, 2016
updated 2.0 ← 1.0 diff Dec 13, 2015
new 1.0 Aug 13, 2015