R Observatory: Metrics for MultiNMix version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

MultiNMix

0.1.0Package record

Multi-Species N-Mixture (MNM) Models with 'nimble'

0packages depend

2Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Niamh MimnaghCRAN page ↗GitHub ↗Issues ↗

Simulating data and fitting multi-species N-mixture models using 'nimble'. Includes features for handling zero-inflation and temporal correlation, Bayesian inference, model diagnostics, parameter estimation, and predictive checks. Designed for ecological studies with zero-altered or time-series data. Mimnagh, N., Parnell, A., Prado, E., & Moral, R. A. (2022) doi:10.1007/s10651-022-00542-7. Royle, J. A. (2004) doi:10.1111/j.0006-341X.2004.00142.x.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("MultiNMix", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("niamhmimnagh/MultiNMix")

Development version from niamhmimnagh/MultiNMix. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-multinmix

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-MultiNMix

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-MultiNMix

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 1.9 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

Documentation signals are not tracked yet for this package.

Websitenot declared in DESCRIPTION

How these are measured

Downloads

2K

CRAN downloads in the past year

Rank #20,927 · ~6/day · ~170/mo

MultiNMix Releases R versions

Daily download trend is not available in this view yet.

21930 days

62790 days

2K1 year

Compare downloads with other packages →

Also on71 r2u4 autocran

How downloads are counted

Repository

niamhmimnagh/multinmix ↗Account: niamhmimnagh

1Stars

0Forks

1Open issues

0Open PRs

0Releases

28Commits

1Commit identities

License file reads as GPL-3.0 · 28 commits · Last activity 2025-03-03

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: 0

How these are measured

PracticesBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/niamhmimnagh/multinmix on 2026-10-11.

Governance and community (1)

Issue templates

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Installing MultiNMix adds 55 packages (27 with compiled code, 54 MB of source tarballs). Heaviest: BH 14 MB, ggplot2 6.0 MB, igraph 4.8 MB.

Depends (2)

R >= 3.5nimble

Imports (8)

clusterGeneration mvtnorm extraDistr rstanstatsabindmethodscoda

LinkingTo (0)

none

Suggests (3)

testthat knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Niamh Mimnagh

Author, Maintainer since 0.1.0 (2025)

Rafael de Andrade Moral

Author

Releases (1)

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.1.0Latest
record
2025-03-19 · current release
R
R 4.4.0 released · 2024-04-24

Package metadata

First published: 2025-03-19
Total releases: 1 / 1 yrs
License: GPL (>= 3) OSI
Download size: 52 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MultiNMix")

Format

Mimnagh, N., & de Andrade Moral, R. (2025). MultiNMix: Multi-Species N-Mixture (MNM) Models with 'nimble' (Version 0.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.MultiNMix

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MultiNMix version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-10-19. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-19, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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