Skip to content

MultiBD

Multivariate Birth-Death Processes

v1.0.2 · Mar 24, 2026 · Apache License 2.0

Description

Computationally efficient functions to provide direct likelihood-based inference for partially-observed multivariate birth-death processes. Such processes range from a simple Yule model to the complex susceptible-infectious-removed model in disease dynamics. Efficient likelihood evaluation facilitates maximum likelihood estimation and Bayesian inference.

Downloads

380

Last 30 days

9980th

892

Last 90 days

2.6K

Last year

Trend: +25.8% (30d vs prior 30d)

CRAN Check Status

1 ERROR
2 NOTE
11 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 ERROR
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (3 non-OK)
NOTE r-oldrel-macos-arm64

installed package size

installed size is  7.6Mb
  sub-directories of 1Mb or more:
    libs   5.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  7.7Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'SIR-MCMC.Rmd' using rmarkdown
! Package pdftex.def Error: File `c9e4a426e91498fb30e071b8b92bb987fe93d870.pdf'
 not found: using draft setting.

Error: processing vignette 'SIR-MCMC.Rmd' failed with diagnostics:
LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/MultiBD.Rcheck/vign_test/MultiBD/vignettes/SIR-MCMC.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See SIR-MCMC.log for more info.
--- failed re-building 'SIR-MCMC.Rmd'

--- re-building 'SIRtrans.Rnw' using knitr
--- finished re-building 'SIRtrans.Rnw'

SUMMARY: processing the following file failed:
  'SIR-MCMC.Rmd'

Error: Vignette re-building failed.
Execution halted

Additional Issues

Intel Details →

Check History

ERROR 11 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 30, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  7.6Mb
  sub-directories of 1Mb or more:
    libs   5.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  7.7Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
ERROR r-oldrel-windows-x86_64

re-building of vignette outputs

Error(s) in re-building vignettes:
--- re-building 'SIR-MCMC.Rmd' using rmarkdown
! Package pdftex.def Error: File `c9e4a426e91498fb30e071b8b92bb987fe93d870.pdf'
 not found: using draft setting.

Error: processing vignette 'SIR-MCMC.Rmd' failed with 
...[truncated]...
ore info.
--- failed re-building 'SIR-MCMC.Rmd'

--- re-building 'SIRtrans.Rnw' using knitr
--- finished re-building 'SIRtrans.Rnw'

SUMMARY: processing the following file failed:
  'SIR-MCMC.Rmd'

Error: Vignette re-building failed.
Execution halted
NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 24, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is  7.6Mb
  sub-directories of 1Mb or more:
    libs   5.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  7.7Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb
WARNING 11 OK · 2 NOTE · 1 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
WARNING r-devel-linux-x86_64-fedora-clang

whether package can be installed

Found the following significant warnings:
  ./bbd.h:360:6: warning: ignoring return value of function declared with 'nodiscard' attribute [-Wunused-result]
See ‘/data/gannet/ripley/R/packages/tests-clang/MultiBD.Rcheck/00install.out’ for details.
* used C++ compiler: ‘clang version 22.1.0 (https://github.com/llvm/llvm-project 4434dabb69916856b824f68a64b029c67175e532)’
NOTE r-oldrel-macos-arm64

installed package size

installed size is  7.6Mb
  sub-directories of 1Mb or more:
    libs   5.9Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is  7.7Mb
  sub-directories of 1Mb or more:
    libs   6.0Mb

Dependency Network

Dependencies Reverse dependencies Rcpp RcppParallel MultiBD

Version History

updated 1.0.2 ← 1.0.1 diff Mar 24, 2026
new 1.0.1 Mar 10, 2026
updated 1.0.1 ← 1.0.0 diff Feb 11, 2026
updated 1.0.0 ← 0.2.0 diff Nov 28, 2025
new 0.2.0 Dec 4, 2016