R Observatory: Metrics for MapGAM version 1.3-1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

CRAN requires the check problems on this package to be fixed before 2026-08-23 or it will be archived.

MapGAM

1.3-1

Mapping Smoothed Effect Estimates from Individual-Level Data

1packages depend

3.7Kdownloads / year

–test coverage

4/13checks pass

Overview

About

Maintained by Scott BartellFirst published 2012-12-1814 releasesCRAN page ↗

Contains functions for mapping odds ratios, hazard ratios, or other effect estimates using individual-level data such as case-control study data, using generalized additive models (GAMs) or Cox models for smoothing with a two-dimensional predictor (e.g., geolocation or exposure to chemical mixtures) while adjusting linearly for confounding variables, using methods described by Kelsall and Diggle (1998), Webster at al. (2006), and Bai et al. (2020). Includes convenient functions for mapping point estimates and confidence intervals, efficient control sampling, and permutation tests for the null hypothesis that the two-dimensional predictor is not associated with the outcome variable (adjusting for confounders).

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("MapGAM", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-mapgam

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-MapGAM

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-MapGAM

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

9ERROR4OK

Failing flavors

ERROR r-devel-linux-x86_64-debian-clang
ERROR r-devel-linux-x86_64-debian-gcc
ERROR r-devel-linux-x86_64-fedora-clang
ERROR r-devel-linux-x86_64-fedora-gcc
ERROR r-devel-windows-x86_64
ERROR r-oldrel-windows-x86_64
ERROR r-patched-linux-x86_64
ERROR r-release-linux-x86_64
ERROR r-release-windows-x86_64

Slowest check: 2.6 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

6

Dependencies · direct

Check history

ERROR2026-08-08
11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE
OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-12
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-09
11 OK · 0 NOTE · 0 WARNING · 2 ERROR · 0 FAILURE

Show 1 earlier snapshots

OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 46%
Documented parameters: not tracked
Return-value docs: not tracked
References docs: 23%

Downloads

3.7K

CRAN downloads in the past year

Rank #10,288 · ~10/day · ~312/mo

Releases R versions

Daily download trend is not available in this view yet.

26630 days

93590 days

3.7K1 year

Compare downloads with other packages →

Also on127 r2u17 autocran

Dependencies

Declared dependencies

7 external dependencies (excludes base and recommended)

Depends (4)

R >= 2.10.0sp gamsurvival

Imports (3)

sf colorspace PBSmapping

LinkingTo (0)

none

Suggests (2)

maps mapproj

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

diversityForest

Code & Tests

Datasets

People & History

People (4)

Maintainer (1)

Scott Bartell

Author, Maintainer

Authors (4)

Scott Bartell

Author, Maintainer

Lu Bai

Author · added in 1.0

Robin Bliss

Author · added in 1.0

Veronica Vieira

Author

Listed in earlier versions (2)

and Robin Bliss

no longer listed · 0.6 to 0.7-5

and Veronica Vieira

no longer listed · 1.0 to 1.3

Package Timeline

14 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.3-1Latest
2025-09-03 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
1.3
2023-07-15 · diff ↗
R
R 4.3.0 released · 2023-04-21
1.2-6
2022-05-26 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
1.2-5
2019-07-27 · diff ↗
R
R 3.6.0 released · 2019-04-26
1.2-4
2019-01-22 · diff ↗
1.2
2018-07-25 · diff ↗
R
R 3.5.0 released · 2018-04-23
1.1
2018-04-10 · diff ↗

Show 13 earlier events

R
R 3.4.0 released · 2017-04-21
1.0
2016-09-03 · diff ↗
R
R 3.3.0 released · 2016-05-03
0.7-5
2015-05-03 · diff ↗
R
R 3.2.0 released · 2015-04-16
0.7-4
2014-12-10 · diff ↗
R
R 3.1.0 released · 2014-04-10
0.7-0
2013-12-13 · diff ↗
R
R 3.0.0 released · 2013-04-03
0.6-2
2013-03-11 · diff ↗
0.6-1
2012-12-24 · diff ↗
0.6
2012-12-18
R
R 2.15.0 released · 2012-03-30

Package metadata

First published: 2012-12-18
Total releases: 14 / 14 yrs
License: GPL-3 OSI
Minimum R: ≥ 2.10.0
Bundled data: 1.3 MB / 7 files
Download size: 1.3 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MapGAM")

Format

Bartell, S., Bai, L., Bliss, R., & Vieira, V. (2025). MapGAM: Mapping Smoothed Effect Estimates from Individual-Level Data (Version 1.3-1) [Computer software]. https://doi.org/10.32614/CRAN.package.MapGAM

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MapGAM version 1.3-1 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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