R Observatory: Metrics for MPR.genotyping version 0.8

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2022-12-05. Its history is shown below.

Reason: issues were not corrected despite reminders

Details below reflect version 0.8, its last release before removal.

MPR.genotyping

0.8Package record

Maximum Parsimony of Recombination to Infer Parental Genotypes

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Weitong GuoCRAN page ↗

Infer parental genotypes based on low-coverage population sequencing data and thus can genotype mapping populations and construct ultra-high density linkage map in a parent-independent manner. Weibo Xie et al. (2010) doi:10.1073/pnas.1005931107.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/MPR.genotyping/MPR.genotyping_0.8.tar.gz"
pkgFile <- "MPR.genotyping_0.8.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.8) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.8

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 26includes a package overview page
Examples that run: 81%13 run in a plain check · 3 only when donttest examples are enabled (R CMD check --as-cran)
Exported functions with examples: 47%
Documented parameters: 97%
Return-value docs: 26%
Help pages citing references: 4%

How these are measured

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on266 r2u11 autocran

How downloads are counted

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (3)

R >= 2.10qtlstats

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Weibo Xie

Author, Maintainer

Weitong Guo

Author

Maintainer since 0.8 (2018)

Releases (1)

R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2022-12-05
issues were not corrected despite reminders
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.8
record
2018-01-24
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2018-01-24
Total releases: 1 / 8 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 2.10
Bundled data: 387 KB / 6 files

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MPR.genotyping")

Format

Guo, W., & Xie, W. (n.d.). MPR.genotyping: Maximum Parsimony of Recombination to Infer Parental Genotypes (Version 0.8) [Computer software]. Retrieved October 19, 2026, from https://CRAN.R-project.org/package=MPR.genotyping

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MPR.genotyping version 0.8 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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