R Observatory: Metrics for MEAanalysis version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

MEAanalysis

0.1.0

Analyse and Visualise Multi Electrode Array Burst Data

0packages depend

6.5Kdownloads / year

52.0%test coverage

11/13checks pass

Overview

About

Maintained by Emily GordonFirst published 2025-05-061 releasesCRAN page ↗GitHub ↗

Analyse and visualise multi electrode array data at the single electrode and whole well level, downstream of 'AxIS Navigator 3.6.2 Software' processing. Compare bursting parameters between time intervals and recordings using the bar chart visualisation functions. Compatible with 12- and 24- well plates.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("MEAanalysis", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("egordon2/MEA-analysis-package")

Development version from egordon2/MEA-analysis-package. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-meaanalysis

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-MEAanalysis

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-MEAanalysis

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-fedora-clang
NOTE r-devel-linux-x86_64-fedora-gcc

Slowest check: 3.0 min · r-release-macos-x86_64

Code health

Yes

Tests · ratio 0.14

52.0%

Coverage · measured lines

100%

Documentation · exports

12

Dependencies · direct

Check history

NOTE2026-06-09
11 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
10 OK · 2 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 98%
Return-value docs: 100%
References docs: 0%

Downloads

6.5K

CRAN downloads in the past year

Rank #8,499 · ~18/day · ~538/mo

Releases R versions

Daily download trend is not available in this view yet.

17130 days

1.1K90 days

6.5K1 year

Compare downloads with other packages →

Also on101 r2u15 autocran

Repository

GitHub ↗ egordon2/mea-analysis-package

1Stars

0Forks

0Open issues

0Open PRs

0Releases

81Commits

1Contributors

License GPL-2.0 · 81 commits · Last activity 2025-05-02 · 0% stars, 30d

Stars over time

2026-03-27 · 12026-07-07 · 1

Repository practices

Upstream repositoryBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/egordon2/mea-analysis-package on 2026-08-16.

Docs source (1)

README.Rmd

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.3.0

Imports (12)

data.table dplyr ggplot2 janitor kableExtra knitr readr readxl reshape2 stringr tidyr tidyverse

LinkingTo (0)

none

Suggests (2)

rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (1)

Maintainer (1)

Emily Gordon

Author, Maintainer

Authors (1)

Emily Gordon

Author, Maintainer

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
0.1.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-05-06
Total releases: 1 / 1 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.3.0
Bundled data: 269 KB / 4 files
Download size: 489 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("MEAanalysis")

Format

Gordon, E. (2025). MEAanalysis: Analyse and Visualise Multi Electrode Array Burst Data (Version 0.1.0) [Computer software]. https://doi.org/10.32614/CRAN.package.MEAanalysis

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for MEAanalysis version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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