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LongDat

A Tool for 'Covariate'-Sensitive Longitudinal Analysis on 'omics' Data

v1.1.3 · Nov 18, 2024 · GPL-2

Description

This tool takes longitudinal dataset as input and analyzes if there is significant change of the features over time (a proxy for treatments), while detects and controls for 'covariates' simultaneously. 'LongDat' is able to take in several data types as input, including count, proportion, binary, ordinal and continuous data. The output table contains p values, effect sizes and 'covariates' of each feature, making the downstream analysis easy.

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CRAN Check Status

14 OK
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK

Check History

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 30, 2026
ERROR 13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Mar 27, 2026
ERROR r-devel-linux-x86_64-fedora-clang

whether package can be installed

Installation failed.
See ‘/data/gannet/ripley/R/packages/tests-clang/LongDat.Rcheck/00install.out’ for details.
OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Dependencies Reverse dependencies lme4 reshape2 glmmTMB emmeans bestNormalize MASS ggplot2 stringr magrittr tibble dplyr rlang car rstatix effsize +2 more dependencies LongDat

Version History

new 1.1.3 Mar 10, 2026
updated 1.1.3 ← 1.1.2 diff Nov 18, 2024
updated 1.1.2 ← 1.1.1 diff Jul 16, 2023
updated 1.1.1 ← 1.1.0 diff Apr 16, 2023
updated 1.1.0 ← 1.0.5 diff Jul 13, 2022
updated 1.0.5 ← 1.0.4 diff Jun 20, 2022
updated 1.0.4 ← 1.0.3 diff May 31, 2022
updated 1.0.3 ← 1.0.2 diff Feb 25, 2022
updated 1.0.2 ← 1.0.1 diff Feb 16, 2022
updated 1.0.1 ← 1.0.0 diff Feb 1, 2022
new 1.0.0 Jan 17, 2022