R Observatory: Metrics for LCox version 0.1.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2022-08-24. Its history is shown below.

Reason: issues were not corrected in time

Details below reflect version 0.1.0, its last release before removal.

LCox

0.1.0Package record

A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Jiehuan SunCRAN page ↗

Longitudinal genomics data and survival outcome are common in biomedical studies. It is of great interest to select genes related to the survival outcome. LCox is a computationally efficient tool for selecting genes related to the survival outcome using the longitudinal genomics data. LCox is powerful to detect different forms of dependence between the longitudinal biomarkers and the survival outcome.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/LCox/LCox_0.1.0.tar.gz"
pkgFile <- "LCox_0.1.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.1.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.0

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 3 (1 internal)
Examples that run: 100%2 run in a plain check
Exported functions with examples: 100%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 67%

How these are measured

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on32 r2u5 autocran

How downloads are counted

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (3)

R >= 3.4.0fdapacesurvival

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (5)

Jiehuan Sun

Author, Maintainer since 0.1.0 (2017)

Author

Author

Author

Author

Releases (1)

R
R 4.3.0 released · 2023-04-21
archivedRemoved from CRAN
2022-08-24
issues were not corrected in time
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.1.0
record
2017-07-17
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-07-17
Total releases: 1 / 9 yrs
License: GPL-2 OSI
Minimum R: ≥ 3.4.0

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("LCox")

Format

Sun, J., Herazo-Maya, J. D., Wang, J., Kaminski, N., & Zhao, H. (n.d.). LCox: A Tool for Selecting Genes Related to Survival Outcomes using Longitudinal Gene Expression Data (Version 0.1.0) [Computer software]. Retrieved October 27, 2026, from https://CRAN.R-project.org/package=LCox

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for LCox version 0.1.0 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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