R Observatory: Metrics for LAGOSNE version 2.0.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

LAGOSNE

2.0.5Package record

Interface to the Lake Multi-Scaled Geospatial and Temporal Database

0packages depend

4.6Kdownloads / year

10.0%test coverage

13/13flavors OK

Overview

About

Maintained by Jemma StachelekCRAN page ↗GitHub ↗Website ↗Issues ↗

Client for programmatic access to the Lake Multi-scaled Geospatial and Temporal database https://lagoslakes.org, with functions for accessing lake water quality and ecological context data for the US.

Changes in 2.0.5

MAINTENANCE CHANGES

Update internal dplyr syntax for release version

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("LAGOSNE", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("cont-limno/LAGOSNE")

Development version from cont-limno/LAGOSNE. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-lagosne

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-LAGOSNE

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-LAGOSNE

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.5 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-05-02
ERROR11 OK, 1 ERROR2026-04-25
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0.5

READMEYes · 866 wordsVignettesYes · 2 · staticNEWSYes · 100% structured · mentions 2.0.5Citation fileYes · cites a publicationWebsiteYes · pkgdown

Help pages: 30 (1 internal)includes a package overview page
Examples that run: 6%1 run in a plain check · 16 never run
Exported functions with examples: 93%
Documented parameters: 98%
Return-value docs: 0%
Help pages citing references: 43%

Vignettes (2)

The Structure of LAGOSNE HTML
Working with LAGOSNE HTML

How these are measured

Downloads

4.6K

CRAN downloads in the past year

Rank #9,434 · ~13/day · ~387/mo

Releases R versions

Daily download trend is not available in this view yet.

43930 days

1K90 days

4.6K1 year

Compare downloads with other packages →

Also on94 r2u2 autocran

How downloads are counted

Repository

cont-limno/lagosne ↗Organization: cont-limno

15Stars

9Forks

3Open issues

0Open PRs

12Releases

661Commits

8Commit identities

water-qualityecologygeosciencelimnologycranrstats

661 commits · Last activity 2026-02-19 · 0% stars, 30d

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 35
Median days to close, 50 most recently updated closed PRs: 2

Stars over time

2024-01-22 · 152026-07-07 · 15

How these are measured

PracticesBeta

10 development-tooling and community-health practices detected across 6 families in the upstream repository

Checks run against github.com/cont-limno/lagosne on 2026-10-22.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux

Docs source (4)

README.Rmdpkgdown

GitHub Pages site last deployed 2026-02-20 · The repository has a site deploy workflow

pkgdown site last built 2026-02-20

Reproducibility and dev environment (1)

data-raw/

CRAN release process (1)

cran-comments.md

Show all practicesHide 2 practices

Lint, format, editor (1)

RStudio project

Git structural (1)

.gitattributes

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

21 external dependencies (excludes base and recommended)

Installing LAGOSNE adds 42 packages (28 with compiled code, 38 MB of source tarballs). Heaviest: stringi 11 MB, sf 9.3 MB, s2 2.8 MB.

Depends (1)

R >= 3.5.0

Imports (14)

dplyr rappdirs purrr magrittr sf curl stringr tibble tidyr memoise rlang progress qs2 xml2

LinkingTo (0)

none

Suggests (7)

testthat knitr rmarkdown devtools R.rsp printr ggplot2

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Jemma Stachelek

Author, Maintainer · added in 2.0.3

Farzan Masrour

Author

Samantha Oliver

Author

Maintainer since 1.0.0 (2017)

Listed in earlier versions (1)

Joseph Stachelek

no longer listed · 1.0.0 to 2.0.2

Releases (9)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
2.0.5Latest
record
2026-02-20 · current release · diff ↗
2.0.4
record
2025-11-27 · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
2.0.3
record
2023-06-17 · diff ↗
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
2.0.2
record
2020-11-29 · diff ↗
R
R 4.0.0 released · 2020-04-24
2.0.1
record
2019-07-29 · diff ↗
2.0.0
record
2019-07-24 · diff ↗ ·
removed 4 exports
lagos_compile, lagos_get, lagos_load, lagos_select

added 3 exports
lagos_get_collins_2017, lagos_load_collins_2017, lagos_path
R
R 3.6.0 released · 2019-04-26
1.2.0
record
2019-01-22 · diff ↗ ·
added 2 exports
display_names, lagosne_version
R
R 3.5.0 released · 2018-04-23

Show 3 earlier eventsHide 3 earlier events

1.1.0
record
2017-12-13 · diff ↗
1.0.0
record
2017-10-18
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-10-18
Total releases: 9 / 9 yrs
License: GPL
Minimum R: ≥ 3.5.0
Download size: 773 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("LAGOSNE")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for LAGOSNE version 2.0.5 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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