R Observatory: Metrics for JSM version 1.0.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

JSM

1.0.2Package record

Semiparametric Joint Modeling of Survival and Longitudinal Data

0packages depend

2.8Kdownloads / year

73.3%test coverage

13/13flavors OK

Overview

About

Maintained by Cong XuCRAN page ↗

Maximum likelihood estimation for the semiparametric joint modeling of survival and longitudinal data. Refer to the Journal of Statistical Software article: doi:10.18637/jss.v093.i02.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("JSM", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-jsm

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-JSM

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-JSM

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 8.2 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK12 OK2026-04-25
NOTE12 OK, 2 NOTE2026-04-22
ERROR11 OK, 2 NOTE, 1 ERROR2026-04-18

Show 1 earlier changeHide 1 earlier change

NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.0.2

READMENoVignettesNoNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Cites a JSS article

Help pages: 15
Examples that run: 62%8 run in a plain check · 5 never run
Exported functions with examples: 100%
Documented parameters: 93%
Return-value docs: 100%
Help pages citing references: 60%

How these are measured

Downloads

2.8K

CRAN downloads in the past year

Rank #14,634 · ~8/day · ~230/mo

Releases R versions

Daily download trend is not available in this view yet.

29130 days

82390 days

2.8K1 year

Compare downloads with other packages →

Also on343 r2u2 autocran

How downloads are counted

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Installing JSM adds 3 packages (3 with compiled code, 3.6 MB of source tarballs). Heaviest: Rcpp 1.8 MB, RcppEigen 1.7 MB, statmod 91 KB.

Depends (5)

R >= 3.0.0nlmesplinesstatmodsurvival

Imports (1)

Rcpp

LinkingTo (2)

Rcpp RcppEigen

Suggests (1)

testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Cong Xu

Author, Maintainer since 0.1.0 (2016)

Pantelis Z. Hadjipantelis

Author

Jane-Ling Wang

Author

Listed in earlier versions (1)

Hadjipantelis

no longer listed · 1.0.2

Releases (7)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
1.0.2Latest
record
2025-06-09 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
unarchivedReturned to CRAN
2020-09-04
1.0.1
record
2020-09-04 · diff ↗
archivedRemoved from CRAN
2020-07-23
check problems were not corrected in time
R
R 4.0.0 released · 2020-04-24
1.0.0
record
2020-04-17 · diff ↗
R
R 3.6.0 released · 2019-04-26
0.1.3
record
2018-05-07 · diff ↗ ·
added 1 export
dataPreprocess
R
R 3.5.0 released · 2018-04-23
0.1.2
record
2017-08-30 · diff ↗

Show 4 earlier eventsHide 4 earlier events

0.1.1
record
2017-06-30 · diff ↗
R
R 3.4.0 released · 2017-04-21
0.1.0
record
2016-08-25
R
R 3.3.0 released · 2016-05-03

Package metadata

First published: 2016-08-25
Total releases: 7 / 10 yrs
License: BSD_3_clause + file LICENSE OSI
Minimum R: ≥ 3.0.0
Bundled data: 138 KB / 6 files
Download size: 187 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("JSM")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.18637/jss.v093.i02.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for JSM version 1.0.2 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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