R Observatory: Metrics for INLAtools version 0.1.5

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

INLAtools

0.1.5Package record

Functionalities for the 'INLA' Package

2packages depend

32Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Elias Teixeira KrainskiCRAN page ↗GitHub ↗Issues ↗

Contain code to work with a C struct, in short cgeneric, to define a Gaussian Markov random (GMRF) model. The cgeneric contain code to specify GMRF elements such as the graph and the precision matrix, and also the initial and prior for its parameters, useful for model inference. It can be accessed from a C program and is the recommended way to implement new GMRF models in the 'INLA' package (https://www.r-inla.org). The 'INLAtools' implement functions to evaluate each one of the model specifications from R. The implemented functionalities leverage the use of 'cgeneric' models and provide a way to debug the code as well to work with the prior for the model parameters and to sample from it. The `generic0` can be used to implement intrinsic models with the scaling as proposed in Sørbye & Rue (2014) doi:10.1016/j.spasta.2013.06.004, and the required constraints. A very useful functionality is the Kronecker product method that creates a new model from multiple cgeneric models. It also works with the rgeneric, the R version of the cgeneric intended to easy try implementation of new GMRF models. The Kronecker between two cgeneric models where each one needs a constraint, such as spatio-temporal intrinsic interaction models, the needed constraints are automatically set.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("INLAtools", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("eliaskrainski/INLAtools")

Development version from eliaskrainski/INLAtools. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-inlatools

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-INLAtools

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-INLAtools

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.6 min · r-devel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK6 OK2026-05-05
ERROR13 OK, 1 ERROR2026-04-09
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.5

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 15
Examples that run: 100%5 run in a plain check
Exported functions with examples: 38%
Documented parameters: 100%
Return-value docs: 69%
Help pages citing references: 7%

Also includes 5 demo scripts (run with demo())

How these are measured

Downloads

32K

CRAN downloads in the past year

Rank #2,339 · ~88/day · ~2.7K/mo

Releases R versions

Daily download trend is not available in this view yet.

2.3K30 days

7.2K90 days

32K1 year

Compare downloads with other packages →

Also on810 r2u3 autocran

How downloads are counted

Repository

eliaskrainski/inlatools ↗Account: eliaskrainski

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2026-10-05 · Default branch at 0.1.5.908, ahead of CRAN 0.1.5 (checked 2026-10-25)

Responsiveness

not measured

How these are measured

PracticesBeta

4 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/eliaskrainski/inlatools on 2026-10-25.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Installing INLAtools adds no packages beyond those that come with R.

Depends (2)

R >= 4.3Matrix

Imports (2)

methodsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

Depends 1 · Imports 1

Depends, Imports or LinkingTo, most downloaded first

INLAspacetime graphpcor

How these are counted

Code & Tests

People & History

People (3)

Elias Teixeira Krainski

Maintainer, Author, Copyright holder · added in 0.1.4

Finn Lindgren

Author · added in 0.0.5

Haavard Rue’

Author

Maintainer since 0.0.1 (2025)

Listed in earlier versions (1)

Teixeira Krainski

no longer listed · 0.0.1 to 0.1.3

Releases (15)

Pick two releases to compare their code metrics.

0.1.5Latest
record
2026-08-31 · current release · diff ↗
unarchivedReturned to CRAN
2026-05-04
0.1.4
record
2026-05-04 · diff ↗ ·
removed 6 exports
cgeneric_shlib, graph, initial, mu, prec, prior

added 12 exports
cgeneric_Q, cgeneric_graph, cgeneric_initial, cgeneric_mu, cgeneric_prior, cgeneric_shlib_path, inlaQ, rgeneric_Q, rgeneric_graph, rgeneric_initial, rgeneric_mu, rgeneric_prior
R
R 4.6.0 released · 2026-04-24
archivedRemoved from CRAN
2026-04-23
errors were not corrected even in re-submission
0.1.3
record
2026-04-22 · diff ↗
0.1.2
record
2026-04-08 · diff ↗ ·
added 3 exports
pcParamCheck, pclrange, pcrange
0.1.1
record
2026-04-03 · diff ↗
0.1.0
record
2026-03-29 · diff ↗
0.0.9
record
2026-02-12 · diff ↗
0.0.8
record
2026-02-02 · diff ↗
0.0.7
record
2026-01-14 · diff ↗ ·
removed 1 export
inla.cgeneric.sample
0.0.6
record
2025-12-19 · diff ↗
0.0.5
record
2025-11-20 · diff ↗ ·
added 3 exports
cgenericBuilder, cgeneric_shlib, multi_generic_model
0.0.4
record
2025-06-23 · diff ↗ ·
added 6 exports
Sparse, cgeneric_generic0, cgeneric_iid, findGetFunction, packageCheck, upperPadding
0.0.3
record
2025-06-16 · diff ↗ ·
added 2 exports
is.zero, rgeneric

Show 3 earlier eventsHide 3 earlier events

0.0.2
record
2025-06-04 · diff ↗
0.0.1
record
2025-06-02
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-06-02
Total releases: 15 / 1 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.3
Download size: 36 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("INLAtools")

Format

Teixeira Krainski, E., Lindgren, F., & Rue’, H. (2026). INLAtools: Functionalities for the 'INLA' Package (Version 0.1.5) [Computer software]. https://doi.org/10.32614/CRAN.package.INLAtools

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for INLAtools version 0.1.5 [Data set]. HJJB, LLC. Data release v2026-10-26. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-26, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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