R Observatory: Metrics for INLAtools version 0.1.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

INLAtools

0.1.4

Functionalities for the 'INLA' Package

2packages depend

27.4Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Elias Teixeira KrainskiFirst published 2025-06-0214 releasesCRAN page ↗GitHub ↗

Contain code to work with a C struct, in short cgeneric, to define a Gaussian Markov random (GMRF) model. The cgeneric contain code to specify GMRF elements such as the graph and the precision matrix, and also the initial and prior for its parameters, useful for model inference. It can be accessed from a C program and is the recommended way to implement new GMRF models in the 'INLA' package (https://www.r-inla.org). The 'INLAtools' implement functions to evaluate each one of the model specifications from R. The implemented functionalities leverage the use of 'cgeneric' models and provide a way to debug the code as well to work with the prior for the model parameters and to sample from it. The `generic0` can be used to implement intrinsic models with the scaling as proposed in Sørbye & Rue (2014) doi:10.1016/j.spasta.2013.06.004, and the required constraints. A very useful functionality is the Kronecker product method that creates a new model from multiple cgeneric models. It also works with the rgeneric, the R version of the cgeneric intended to easy try implementation of new GMRF models. The Kronecker between two cgeneric models where each one needs a constraint, such as spatio-temporal intrinsic interaction models, the needed constraints are automatically set.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("INLAtools", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("eliaskrainski/INLAtools")

Development version from eliaskrainski/INLAtools. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-inlatools

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-INLAtools

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-INLAtools

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.6 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

3

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-05-05
6 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-09
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 69%
References docs: 7%

Downloads

27.4K

CRAN downloads in the past year

Rank #2,638 · ~75/day · ~2.3K/mo

Releases R versions

Daily download trend is not available in this view yet.

1.8K30 days

6.6K90 days

27.4K1 year

Compare downloads with other packages →

Also on810 r2u20 autocran

Repository

GitHub ↗ eliaskrainski/inlatools

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2026-08-23

Repository practices

Upstream repositoryBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/eliaskrainski/inlatools on 2026-08-23.

Continuous integration (1)

GitHub Actions

Docs source (1)

README.Rmd

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

0 external dependencies (excludes base and recommended)

Depends (2)

R >= 4.3Matrix

Imports (2)

methodsutils

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

2direct

0indirect

graphpcor INLAspacetime

Code & Tests

People & History

People (3)

Maintainer (1)

Elias Teixeira Krainski

Maintainer, Author, Copyright holder · added in 0.1.4

Authors (3)

Elias Teixeira Krainski

Maintainer, Author, Copyright holder · added in 0.1.4

Finn Lindgren

Author · added in 0.0.5

Haavard Rue’

Author

Copyright holders (1)

Elias Teixeira Krainski

Maintainer, Author, Copyright holder · added in 0.1.4

Listed in earlier versions (1)

Teixeira Krainski

no longer listed · 0.0.1 to 0.1.3

Package Timeline

14 releases. Pick two to compare their code metrics. R releases are shown for context.

0.1.4Latest
2026-05-04 · current release · diff ↗
unarchivedReturned to CRAN
2026-05-04
R
R 4.6.0 released · 2026-04-24
archivedRemoved from CRAN
2026-04-23
errors were not corrected even in re-submission
0.1.3
2026-04-22 · diff ↗
0.1.2
2026-04-08 · diff ↗
0.1.1
2026-04-03 · diff ↗
0.1.0
2026-03-29 · diff ↗
0.0.9
2026-02-12 · diff ↗
0.0.8
2026-02-02 · diff ↗
0.0.7
2026-01-14 · diff ↗
0.0.6
2025-12-19 · diff ↗
0.0.5
2025-11-20 · diff ↗
0.0.4
2025-06-23 · diff ↗
0.0.3
2025-06-16 · diff ↗
0.0.2
2025-06-04 · diff ↗

Show 2 earlier events

0.0.1
2025-06-02
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-06-02
Total releases: 14 / 1 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 4.3
Download size: 36 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("INLAtools")

Format

Teixeira Krainski, E., Lindgren, F., & Rue’, H. (2026). INLAtools: Functionalities for the 'INLA' Package (Version 0.1.4) [Computer software]. https://doi.org/10.32614/CRAN.package.INLAtools

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for INLAtools version 0.1.4 [Data set]. HJJB, LLC. Data release v2026-08-24. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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