R Observatory: Metrics for HSSVD version 1.2

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2021-01-02. Its history is shown below.

Reason: requires archived package 'bcv'

Details below reflect version 1.2, its last release before removal.

HSSVD

1.2Package record

Biclustering with Heterogeneous Variance

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Guanhua ChenCRAN page ↗

A data mining tool for discovering subgroups of patients and genes that simultaneously display unusual levels of variability compared to other genes and patients. Based on sparse singular value decomposition (SSVD), the method can detect both mean and variance biclusters in the presence of heterogeneous residual variance.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/HSSVD/HSSVD_1.2.tar.gz"
pkgFile <- "HSSVD_1.2.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.2) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.2

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 3includes a package overview page
Examples that run: 100%2 run in a plain check
Exported functions with examples: 100%
Documented parameters: 63%
Return-value docs: 100%
Help pages citing references: 100%

How these are measured

Downloads

HSSVD Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on5 autocran

How downloads are counted

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Depends (2)

R >= 2.10bcv

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Guanhua Chen

Author, Maintainer since 1.1 (2014)

Michael Kosorok

Author

Shannon Holloway

Contributor

Releases (2)

Pick two releases to compare their code metrics.

R
R 4.1.0 released · 2021-05-18
archivedRemoved from CRAN
2021-01-02
requires archived package 'bcv'
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
1.2
record
2014-12-03 · diff ↗
1.1
record
2014-07-21
R
R 3.1.0 released · 2014-04-10

Package metadata

First published: 2014-07-21
Total releases: 2 / 12 yrs
License: GPL-2 OSI
Minimum R: ≥ 2.10
Bundled data: 1.7 MB / 2 files

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("HSSVD")

Format

Chen, G., Kosorok, M., & Holloway, S. (n.d.). HSSVD: Biclustering with Heterogeneous Variance (Version 1.2) [Computer software]. Retrieved October 25, 2026, from https://CRAN.R-project.org/package=HSSVD

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for HSSVD version 1.2 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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