R Observatory: Metrics for HCPclust version 0.1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

HCPclust

0.1.1Package record

Hierarchical Conformal Prediction for Clustered Data with Missing Responses

0packages depend

1.7Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Menghan YiCRAN page ↗GitHub ↗Issues ↗

Implements hierarchical conformal prediction for clustered data with missing responses. The method uses repeated cluster-level splitting and within-cluster subsampling to accommodate dependence, and inverse-probability weighting to correct distribution shift induced by missingness. Conditional densities are estimated by inverting fitted conditional quantiles (linear quantile regression or quantile regression forests), and p-values are aggregated across resampling and splitting steps using the Cauchy combination test.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("HCPclust", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("judywangstat/HCP")

Development version from judywangstat/HCP. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-hcpclust

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-HCPclust

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-HCPclust

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 1.5 min · r-oldrel-macos-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.1.1

READMEYes · 699 wordsVignettesNoNEWSYes · 67% structured · does not mention 0.1.1Citation fileNoWebsitenot declared in DESCRIPTION

Help pages: 6
Examples that run: 100%6 run in a plain check
Exported functions with examples: 100%
Documented parameters: 94%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

1.7K

CRAN downloads in the past year

Rank #20,896 · ~5/day · ~143/mo

Releases R versions

Daily download trend is not available in this view yet.

24930 days

62390 days

1.7K1 year

Compare downloads with other packages →

Also on48 r2u3 autocran

How downloads are counted

Repository

judywangstat/hcp ↗Account: judywangstat

0Stars

1Forks

0Open issues

0Open PRs

0Releases

57Commits

3Commit identities

57 commits · Last activity 2026-05-02 · Default branch at 0.1.2, ahead of CRAN 0.1.1 (checked 2026-10-11)

Responsiveness

How these are sampled

PRs merged (all time): 0%
Median days to close, 50 most recently updated closed issues: not measured
Median days to close, 50 most recently updated closed PRs: 0

Forks over time

2026-07-07 · 02026-10-01 · 1

How these are measured

PracticesBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/judywangstat/hcp on 2026-10-11.

CRAN release process (1)

cran-comments.md

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

12 external dependencies (excludes base and recommended)

Installing HCPclust adds 15 packages (12 with compiled code, 16 MB of source tarballs). Heaviest: data.table 5.7 MB, Rcpp 1.8 MB, RcppEigen 1.7 MB.

Depends (0)

none

Imports (5)

statsgrf quantreg xgboost quantregForest

LinkingTo (0)

none

Suggests (9)

foreach doParallel doRNGparalleltestthat knitr rmarkdown FNN rstudioapi

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (2)

Menghan Yi

Author, Maintainer since 0.1.1 (2026)

Judy Wang

Author

Releases (1)

R
R 4.6.0 released · 2026-04-24
0.1.1Latest
record
2026-01-30 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-01-30
Total releases: 1 / 1 yrs
License: MIT + file LICENSE OSI
Download size: 33 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("HCPclust")

Format

Yi, M., & Wang, J. (2026). HCPclust: Hierarchical Conformal Prediction for Clustered Data with Missing Responses (Version 0.1.1) [Computer software]. https://doi.org/10.32614/CRAN.package.HCPclust

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for HCPclust version 0.1.1 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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