R Observatory: Metrics for GFMaps version 1.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2009-02-03. Its history is shown below.

Details below reflect version 1.1, its last release before removal.

GFMaps

1.1Package record

Visualization technique for interpretation of high-throughput genetic or proteomic experiments.

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Kanika AroraCRAN page ↗

GFMaps integrates datasets derived from gene expression profiles with preexisting information from public databases such as KEGG pathway or Gene Ontology using Gene Set Enrichment Analysis (GSEA) and introduce a framework that allow us to visualize biologically annotated datasets and relevant ratings of genes via a color gradient.

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/GFMaps/GFMaps_1.1.tar.gz"
pkgFile <- "GFMaps_1.1.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (1.1) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 1.1

READMENoVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 2includes a package overview page
Examples that run: 100%1 run in a plain check
Exported functions with examples: 100%
Documented parameters: not tracked
Return-value docs: not tracked
Help pages citing references: 100%

How these are measured

Downloads

GFMaps Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

How downloads are counted

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Depends (5)

affy topGO plotrix KEGG.db hgu95av2.db

Imports (0)

none

LinkingTo (0)

none

Suggests (1)

ALL

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (2)

Dr. Sanjay Bhatikar

Contributor

Kanika Arora

Contributor · added in 1.1

Maintainer since 1.0 (2009)

Listed in earlier versions (1)

Kanika Arora kanika.arora@biobase.

no longer listed · 1.0

Releases (2)

Pick two releases to compare their code metrics.

R
R 2.9.0 released · 2009-04-17
1.1
record
2009-02-03 · diff ↗
1.1archived
2009-02-03 · diff ↗
1.0
record
2009-01-29
R
R 2.8.0 released · 2008-10-20

Package metadata

First published: 2009-01-29
Total releases: 2 / 17 yrs
License: GPL (>= 2) OSI

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("GFMaps")

Format

Bhatikar, D. S., & Arora, K. (n.d.). GFMaps: Visualization technique for interpretation of high-throughput genetic or proteomic experiments. (Version 1.1) [Computer software]. Retrieved October 26, 2026, from https://CRAN.R-project.org/package=GFMaps

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for GFMaps version 1.1 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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