R Observatory: Metrics for FluxSeparator version 2.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

FluxSeparator

2.0.0

Separation of Diffusive and Ebullitive Fluxes

0packages depend

1.9Kdownloads / year

13.9%test coverage

13/13checks pass

Overview

About

Maintained by Jonas Stage SøFirst published 2026-03-292 releasesCRAN page ↗GitHub ↗

Separates diffusive and ebullitive (bubble) fluxes from continuous concentration measurements using a running variance approach. Ebullitive events are identified when the running variance exceeds a user-set threshold. Diffusive fluxes are calculated via linear regression on the non-ebullitive portion of the data. See Sø et al. (2024) doi:10.1029/2024JG008035 for details.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("FluxSeparator", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("JonasStage/FluxSeparator")

Development version from JonasStage/FluxSeparator. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-fluxseparator

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-FluxSeparator

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-FluxSeparator

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.8 min · r-oldrel-macos-x86_64

Code health

Yes

Tests · ratio 0.06

13.9%

Coverage · measured lines

83%

Documentation · exports

19

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-30
7 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 50%
Documented parameters: 100%
Return-value docs: 80%
References docs: 50%

Downloads

1.9K

CRAN downloads in the past year

Rank #9,586 · ~5/day · ~156/mo

Releases R versions

Daily download trend is not available in this view yet.

19930 days

98990 days

1.9K1 year

Compare downloads with other packages →

Also on38 r2u1 autocran

Repository

GitHub ↗ jonasstage/fluxseparator

6Stars

0Forks

1Open issues

0Open PRs

3Releases

69Commits

1Contributors

69 commits · Last activity 2026-06-05

Stars over time

2025-06-16 · 62026-07-07 · 6

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/jonasstage/fluxseparator on 2026-08-16.

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

20 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1.0

Imports (19)

broom dplyr DT ggplot2 ggpubrgraphicsHMR lubridate magrittr purrr readr rlang shiny shinydashboardstatsstringr tidyr TTR patchwork

LinkingTo (0)

none

Suggests (3)

knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (3)

Maintainer (1)

Jonas Stage Sø

Author, Maintainer

Authors (1)

Jonas Stage Sø

Author, Maintainer

Contributors (2)

Theis Kragh

Contributor

Kaj Sand-Jensen

Contributor

Package Timeline

2 releases. Pick two to compare their code metrics. R releases are shown for context.

2.0.0Latest
2026-06-02 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
1.0.1
2026-03-29
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2026-03-29
Total releases: 2 / 1 yrs
License: MIT + file LICENSE OSI
Minimum R: ≥ 4.1.0
Bundled data: 213 KB / 2 files
Download size: 113 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("FluxSeparator")

Format

Sø, J. S., Kragh, T., & Sand-Jensen, K. (2026). FluxSeparator: Separation of Diffusive and Ebullitive Fluxes (Version 2.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.FluxSeparator

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for FluxSeparator version 2.0.0 [Data set]. HJJB, LLC. Data release v2026-08-17. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-17, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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