R Observatory: Metrics for FRApp version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

FRApp

1.0.0

FRAP Data Analysis Using Nonlinear Mixed Effect Models with 'shiny'

0packages depend

2Kdownloads / year

–test coverage

13/13checks pass

Overview

About

Maintained by Gioia Di CredicoFirst published 2025-02-241 releasesCRAN page ↗GitHub ↗

Analysis of Fluorescence Recovery After Photobleaching (FRAP) experiments using nonlinear mixed-effects regression models and analysis of the results. 'FRApp' is not limited to the analysis of FRAP experiments only. Any nonlinear mixed-effects models with an asymptotic exponential functional relationship to hierarchical data in various domains can be fitted. The analysis of data available in the package is presented in Di Credico, G., Pelucchi, S., Pauli, F. et al. (2025) doi:10.1038/s41598-025-87154-w.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("FRApp", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("gioiadc/FRApp")

Development version from gioiadc/FRApp. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-frapp

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-FRApp

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-FRApp

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 2.2 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

8

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 573 wordsVignettesYes · dynamicpkgdown siteNoNEWSYes · 67% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: not tracked
Return-value docs: 100%
References docs: 0%

Downloads

2K

CRAN downloads in the past year

Rank #20,472 · ~5/day · ~167/mo

Releases R versions

Daily download trend is not available in this view yet.

12730 days

54390 days

2K1 year

Compare downloads with other packages →

Also on107 r2u20 autocran

Repository

GitHub ↗ gioiadc/frapp

0Stars

0Forks

1Open issues

0Open PRs

1Releases

31Commits

1Contributors

License GPL-3.0 · 31 commits · Last activity 2025-02-21

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 1 family in the upstream repository

Checks run against github.com/gioiadc/frapp on 2026-08-16.

CRAN release process (2)

cran-comments.mdrevdep/

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (1)

R >= 2.10

Imports (8)

nlmeshiny gplotsgrDevicesgraphicsmethodsstatsutils

LinkingTo (0)

none

Suggests (3)

knitr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (1)

Maintainer (1)

Gioia Di Credico

Author, Maintainer, Copyright holder

Authors (1)

Gioia Di Credico

Author, Maintainer, Copyright holder

Copyright holders (1)

Gioia Di Credico

Author, Maintainer, Copyright holder

Package Timeline

1 release. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
1.0.0Latest
2026-03-10 · current release
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-02-24
Total releases: 1 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 2.10
Bundled data: 67 KB / 1 file
Download size: 1.7 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("FRApp")

Format

Di Credico, G. (2025). FRApp: FRAP Data Analysis Using Nonlinear Mixed Effect Models with 'shiny' (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.FRApp

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for FRApp version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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