R Observatory: Metrics for EquiNorm version 2.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2013-09-23. Its history is shown below.

Reason: the maintainer was unable to update it for 'lme4' >= 1.0

Details below reflect version 2.0, its last release before removal.

EquiNorm

2.0

Normalize expression data using equivalently expressed genes

0packages depend

–downloads / year

–test coverage

–checks pass

Overview

About

Maintained by Li-Xuan Qin4 releasesCRAN page ↗

Normalize oligonucleotide gene expression data using equivalently expressed genes in experiments comparing two groups of samples (for example, case-control samples), as outlined in L-X Qin and JM Satagopan (2009).

Install

R (source archive)

url <- "https://cran.r-project.org/src/contrib/Archive/EquiNorm/EquiNorm_2.0.tar.gz"
pkgFile <- "EquiNorm_2.0.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (2.0) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

Health

CRAN checks

CRAN check results are not tracked yet.

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

5

Dependencies · direct

Documentation

READMENoVignettesNopkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 100%
Return-value docs: 100%
References docs: 13%

Downloads

EquiNorm Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Dependencies

Declared dependencies

3 external dependencies (excludes base and recommended)

Depends (3)

R >= 2.8.0Matrixlattice

Imports (3)

lme4 mvtnorm lemma

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Other (3)

Li-Xuan Qin

Contributor

Jaya M. Satagopan

Contributor

Brian Denton

Contributor · added in 2.0

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 3.1.0 released · 2014-04-10
archivedRemoved from CRAN
2013-09-23
the maintainer was unable to update it for 'lme4' >= 1.0
R
R 3.0.0 released · 2013-04-03
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
2.0
2011-03-24 · diff ↗
1.1
2011-03-16 · diff ↗
1.0.1
2010-11-30 · diff ↗
R
R 2.12.0 released · 2010-10-15
1.0
2010-06-04
R
R 2.11.0 released · 2010-04-22

Package metadata

Total releases: 4
License: GPL (>= 2) OSI
Minimum R: ≥ 2.8.0
Bundled data: 801 KB / 1 file
Download size: not tracked yet
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("EquiNorm")

Format

Qin, L., Satagopan, J. M., & Denton, B. (n.d.). EquiNorm: Normalize expression data using equivalently expressed genes (Version 2.0) [Computer software]. Retrieved August 13, 2026, from https://CRAN.R-project.org/package=EquiNorm

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for EquiNorm version 2.0 [Data set]. HJJB, LLC. Data release v2026-08-11. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-11, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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