R Observatory: Metrics for DOEpro version 2.0.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

DOEpro

2.0.1Package record

Analysis of Designed Agricultural Experiments

0packages depend

604downloads / year

47.5%test coverage

13/13flavors OK

Overview

About

Maintained by Uzair Javid KhanCRAN page ↗GitHub ↗Website ↗Issues ↗

A 'shiny' application and supporting functions for the analysis of designed agricultural experiments, following the procedures set out by Gomez and Gomez (1984, ISBN:9780471870920). Handles completely randomised, randomised complete block, Latin square, factorial (up to four factors), split-plot and strip-plot designs, and pooled (combined) analysis over environments including factorial treatments, after Yates and Cochran (1938) doi:10.1017/S0021859600050978; analyses several response variables simultaneously; recommends and applies variance-stabilising transformations using the profile likelihood of Box and Cox (1964) doi:10.1111/j.2517-6161.1964.tb00553.x; reports standard errors and critical differences for every legitimate comparison, including the four distinct comparisons of a split plot, the mixed ones using the approximation of Satterthwaite (1946) doi:10.2307/3002019; and produces publication-format tables of means, diagnostic plots and a written interpretation.

Changes in 2.0.1

Changes made in response to the CRAN review of version 2.0.0.

Software names are quoted and the methods are referenced with their DOIs in the package description.
\value is documented for the exported DESIGNS and TRANS objects.
demo_data() no longer sets a random seed. The example datasets are now built from a stored vector of deviates, so they are identical on every machine and the user's random number stream is left untouched.
The plain-text report saves and restores the user's graphical parameters with an immediate on.exit().

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("DOEpro", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("Uzairkhan11w/DOEpro")

Development version from Uzairkhan11w/DOEpro. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-doepro

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-DOEpro

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-DOEpro

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.0 min · r-oldrel-windows-x86_64

Status changes

OK13 OKNow
OK7 OK2026-08-05

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 2.0.1

READMEYes · 1,701 wordsVignettesNoNEWSYes · 100% structured · mentions 2.0.1Citation fileYes · software entry onlyWebsiteYes

Help pages: 10 (3 internal)includes a package overview page
Examples that run: 100%7 run in a plain check (1 of them under a condition)
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 0%

How these are measured

Downloads

604

CRAN downloads in the past year

Rank #21,840 · ~2/day · ~50/mo

Releases R versions

Daily download trend is not available in this view yet.

23230 days

60490 days

6041 year

Compare downloads with other packages →

Also on14 r2u3 autocran

How downloads are counted

Repository

uzairkhan11w/doepro ↗Account: Uzairkhan11w

0Stars

0Forks

0Open issues

0Open PRs

2Releases

31Commits

1Commit identities

31 commits · Last activity 2026-10-16

Responsiveness

not measured

Releases over time

2026-08-05 · 12026-08-06 · 2

How these are measured

PracticesBeta

6 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/uzairkhan11w/doepro on 2026-10-18.

Continuous integration (2)

GitHub ActionsR CMD check workflow

The R CMD check workflow runs on Linux, macOS and Windows, and on R-devel

Docs source (1)

GitHub Pages site last deployed 2026-10-16

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Research and citation (1)

CITATION.cff

How this is detected·Detection ruleset v3 (2026-09-26)

AI coding toolsBeta

This repository shows signs of AI coding tools.

Claude Codefirst seen 2026-10-07
Named in .Rbuildignore: CLAUDE.md
Named in .gitignore: CLAUDE.md
Commits: at least 18 crediting it in the message

Models named in its commits

Claude Opus 5.518 commits · Oct 2026

Counts are commits, not lines of code. Commits by a tool's accounts count once across all of its accounts. Commits crediting it are the largest count among its credit lines, a minimum.How this is detected·Detection ruleset v4 (updated 2026-09-27)

Dependencies

Declared dependencies

6 external dependencies (excludes base and recommended)

Installing DOEpro adds 52 packages (26 with compiled code, 43 MB of source tarballs). Heaviest: ggplot2 6.0 MB, bslib 5.6 MB, promises 3.1 MB.

Depends (1)

R >= 4.0

Imports (8)

shiny DT ggplot2 rlangstatsutilsgraphicsgrDevices

LinkingTo (0)

none

Suggests (2)

pagedown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

People & History

People (3)

Uzair Javid Khan

Author, Maintainer since 2.0.1 (2026)

M. Iqbal Jeelani

Author

Immad A. Shah

Author

Releases (1)

2.0.1Latest
record
2026-08-04 · current release
R
R 4.6.0 released · 2026-04-24

Package metadata

First published: 2026-08-04
Total releases: 1 / 1 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 4.0
Download size: 96 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("DOEpro")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.5281/zenodo.21399570.

The repository also keeps a CITATION.cff.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DOEpro version 2.0.1 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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