R Observatory: Metrics for DMRnet version 0.4.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

DMRnet

0.4.1Package record

Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data

0packages depend

5.9Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Szymon NowakowskiCRAN page ↗GitHub ↗Issues ↗

Model selection algorithms for regression and classification, where the predictors can be continuous or categorical and the number of regressors may exceed the number of observations. The selected model consists of a subset of numerical regressors and partitions of levels of factors. Szymon Nowakowski, Piotr Pokarowski, Wojciech Rejchel and Agnieszka Sołtys, 2023. Improving Group Lasso for High-Dimensional Categorical Data. In: Computational Science – ICCS 2023. Lecture Notes in Computer Science, vol 14074, p. 455-470. Springer, Cham. doi:10.1007/978-3-031-36021-3_47. Aleksandra Maj-Kańska, Piotr Pokarowski and Agnieszka Prochenka, 2015. Delete or merge regressors for linear model selection. Electronic Journal of Statistics 9(2): 1749-1778. doi:10.1214/15-EJS1050. Piotr Pokarowski and Jan Mielniczuk, 2015. Combined l1 and greedy l0 penalized least squares for linear model selection. Journal of Machine Learning Research 16(29): 961-992. https://www.jmlr.org/papers/volume16/pokarowski15a/pokarowski15a.pdf. Piotr Pokarowski, Wojciech Rejchel, Agnieszka Sołtys, Michał Frej and Jan Mielniczuk, 2022. Improving Lasso for model selection and prediction. Scandinavian Journal of Statistics, 49(2): 831–863. doi:10.1111/sjos.12546.

Changes in 0.4.1

Fixed invalid lambda.1se computation ((issue #69))
Changed the presentation of CV plots to reflect that fix
Updated documentation and the vignette

From NEWS.md in the release

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("DMRnet", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("SzymonNowakowski/DMRnet")

Development version from SzymonNowakowski/DMRnet. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-dmrnet

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-DMRnet

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-DMRnet

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 2.2 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK13 OK2026-05-10
WARNING12 OK, 1 WARNING2026-05-09
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.4.1

READMEYes · 962 wordsVignettesYes · 1 · dynamicNEWSYes · 100% structured · mentions 0.4.1Citation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 18includes a package overview page
Examples that run: 94%17 run in a plain check · 1 never run
Exported functions with examples: 100%
Documented parameters: 74%
Return-value docs: 100%
Help pages citing references: 17%

Vignettes (1)

Getting Started with DMRnet HTML

How these are measured

Downloads

5.9K

CRAN downloads in the past year

Rank #8,355 · ~16/day · ~489/mo

Releases R versions

Daily download trend is not available in this view yet.

41430 days

1.1K90 days

5.9K1 year

Compare downloads with other packages →

Also on76 r2u6 autocran

How downloads are counted

Repository

szymonnowakowski/dmrnet ↗Account: SzymonNowakowskiFork of cran/DMRnet

1Stars

0Forks

4Open issues

0Open PRs

6Releases

335Commits

3Commit identities

group-lassolassopartitionselectionvariable-selectionpartition-selection

335 commits · Last activity 2025-08-19 · Default branch at 0.4.1.9000, ahead of CRAN 0.4.1 (checked 2026-10-18)

Responsiveness

How these are sampled

PRs merged (all time): 100%
Median days to close, 50 most recently updated closed issues: 79
Median days to close, 50 most recently updated closed PRs: 0

Stars over time

2024-06-07 · 12026-07-07 · 1

How these are measured

PracticesBeta

3 development-tooling and community-health practices detected across 3 families in the upstream repository

Checks run against github.com/szymonnowakowski/dmrnet on 2026-10-18.

Continuous integration (1)

GitHub Actions

CRAN release process (1)

cran-comments.md

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v3 (2026-09-26)

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Installing DMRnet adds 8 packages (5 with compiled code, 7.5 MB of source tarballs). Heaviest: glmnet 2.7 MB, Rcpp 1.8 MB, RcppEigen 1.7 MB.

Depends (0)

none

Imports (6)

hclust1d glmnet grpregstatsgraphicsutils

LinkingTo (0)

none

Suggests (2)

rmarkdown knitr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (3)

Szymon Nowakowski

Author, Maintainer since 0.3.1 (2022) · added in 0.3.1

Piotr Pokarowski

Author

Agnieszka Prochenka-Sołtys

Author

previous maintainer for versions <= 0.2.0

Previously maintained by Agnieszka Prochenka-Sołtys (0.1.0 to 0.2.0).

Releases (8)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
0.4.1Latest
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2025-08-18 · current release · diff ↗
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.4.0
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2023-08-07 · diff ↗
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R 4.3.0 released · 2023-04-21
0.3.4
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2023-01-31 · diff ↗
0.3.3
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2022-11-16 · diff ↗
0.3.2
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2022-10-07 · diff ↗
0.3.1
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2022-07-19 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
0.2.0
record
2018-03-24 · diff ↗

Show 2 earlier eventsHide 2 earlier events

0.1.0
record
2017-09-05
R
R 3.4.0 released · 2017-04-21

Package metadata

First published: 2017-09-05
Total releases: 8 / 9 yrs
License: GPL-2 OSI
Bundled data: 21 KB / 2 files
Download size: 113 KB

Cite

Cite this package

Run in R for the authors' entry:

citation("DMRnet")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.1007/978-3-031-36021-3_47.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DMRnet version 0.4.1 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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