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DFD

Extract Drugs from Differential Expression Data from LINCS Database

v0.4.0 · Dec 22, 2025 · GPL-3

Description

Get Drug information from given differential expression profile. The package search for the bioactive compounds from reference databases such as LINCS containing the genome-wide gene expression signature (GES) from tens of thousands of drug and genetic perturbations (Subramanian et al. (2017) <DOI:10.1016/j.cell.2017.10.049>).

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CRAN Check Status

1 NOTE
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r-devel-linux-x86_64-debian-clang OK
r-devel-linux-x86_64-debian-gcc OK
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (1 non-OK)
NOTE r-oldrel-macos-arm64

package dependencies

Packages suggested but not available for checking:
  'signatureSearch', 'signatureSearchData'

Check History

NOTE 13 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

package dependencies

Packages suggested but not available for checking:
  'signatureSearch', 'signatureSearchData'

Dependency Network

Dependencies Reverse dependencies stringr gprofiler2 scales ggplot2 gridExtra ggpubr DFD

Version History

new 0.4.0 Mar 10, 2026
updated 0.4.0 ← 0.3.0 diff Dec 21, 2025
updated 0.3.0 ← 0.2.0 diff Feb 10, 2025
updated 0.2.0 ← 0.1.0 diff Aug 27, 2024
new 0.1.0 Oct 9, 2023