R Observatory: Metrics for DAAGbio version 0.63-4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

DAAGbio

0.63-4

Data Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences

0packages depend

2.9Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by John MaindonaldFirst published 2007-03-3010 releasesCRAN page ↗GitHub ↗

Data sets and functions, for the display of gene expression array (microarray) data, and for demonstrations with such data.

Install

R (CRAN)pak (dev)Ubuntu (r2u)

install.packages("DAAGbio", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("jhmaindonald/DAAGbio")

Development version from jhmaindonald/DAAGbio. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-daagbio

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 1.4 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

1

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSYes · 0% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 82%
Return-value docs: 33%
References docs: 13%

Downloads

2.9K

CRAN downloads in the past year

Rank #12,161 · ~8/day · ~242/mo

Releases R versions

Daily download trend is not available in this view yet.

22730 days

81490 days

2.9K1 year

Compare downloads with other packages →

Also on201 r2u

Repository

GitHub ↗ jhmaindonald/daagbio

0Stars

0Forks

0Open issues

0Open PRs

0Releases

License MIT · Last activity 2023-08-19

Repository practices

Upstream repositoryBeta

Checks run against github.com/jhmaindonald/daagbio on 2026-08-16.

No development-tooling practices detected in the upstream repository.

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

4 external dependencies (excludes base and recommended)

Depends (2)

R >= 3.0.0limma

Imports (0)

none

LinkingTo (0)

none

Suggests (3)

DAAG locfit knitr

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (0)

Author records are not tracked yet for this package.

Listed in earlier versions (1)

John Maindonald

no longer listed · 0.5-0 to 0.63-4

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
0.63-4Latest
2023-08-21 · current release · diff ↗
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
0.63-3
2017-03-09 · diff ↗
0.63-1
2016-08-18 · diff ↗
R
R 3.3.0 released · 2016-05-03
R
R 3.2.0 released · 2015-04-16
R
R 3.1.0 released · 2014-04-10

Show 20 earlier events

0.62
2013-10-05 · diff ↗
R
R 3.0.0 released · 2013-04-03
0.61
2013-02-18 · diff ↗
R
R 2.15.0 released · 2012-03-30
R
R 2.14.0 released · 2011-10-31
R
R 2.13.0 released · 2011-04-13
0.6
2011-04-09 · diff ↗
R
R 2.12.0 released · 2010-10-15
0.5-3
2010-08-08 · diff ↗
R
R 2.11.0 released · 2010-04-22
R
R 2.10.0 released · 2009-10-26
R
R 2.9.0 released · 2009-04-17
0.5-2
2009-01-13 · diff ↗
R
R 2.8.0 released · 2008-10-20
R
R 2.7.0 released · 2008-04-22
R
R 2.6.0 released · 2007-10-03
0.5-1
2007-07-23 · diff ↗
R
R 2.5.0 released · 2007-04-24
0.5-0
2007-03-30
R
R 2.4.0 released · 2006-10-03

Package metadata

First published: 2007-03-30
Total releases: 10 / 19 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.0.0
Bundled data: 413 KB / 5 files
Download size: 3.9 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("DAAGbio")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DAAGbio version 0.63-4 [Data set]. HJJB, LLC. Data release v2026-08-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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