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Cyclops

Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis

v3.7.0 · Feb 27, 2026 · Apache License 2.0

Description

This model fitting tool incorporates cyclic coordinate descent and majorization-minimization approaches to fit a variety of regression models found in large-scale observational healthcare data. Implementations focus on computational optimization and fine-scale parallelization to yield efficient inference in massive datasets. Please see: Suchard, Simpson, Zorych, Ryan and Madigan (2013) <doi:10.1145/2414416.2414791>.

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CRAN Check Status

6 NOTE
8 OK
Show all 14 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang OK
r-devel-linux-x86_64-fedora-gcc OK
r-devel-macos-arm64 OK
r-devel-windows-x86_64 NOTE
r-oldrel-macos-arm64 NOTE
r-oldrel-macos-x86_64 NOTE
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 NOTE
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (6 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

compiled code

File ‘Cyclops/libs/Cyclops.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-linux-x86_64-debian-gcc

compiled code

File ‘Cyclops/libs/Cyclops.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.
NOTE r-devel-windows-x86_64

compiled code

File 'Cyclops/libs/x64/Cyclops.dll':
  Found non-API call to R: 'R_UnboundValue'

Compiled code should not call non-API entry points in R.

See 'Writing portable packages' in the 'Writing R Extensions' manual,
and section 'Moving into C API compliance' for issues with the use of
non-API entry points.
NOTE r-oldrel-macos-arm64

installed package size

installed size is 28.8Mb
  sub-directories of 1Mb or more:
    libs  28.0Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 31.5Mb
  sub-directories of 1Mb or more:
    libs  30.7Mb
NOTE r-patched-linux-x86_64

compiled code

File ‘Cyclops/libs/Cyclops.so’:
  Found non-API call to R: ‘R_UnboundValue’

Compiled code should not call non-API entry points in R.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual,
and section ‘Moving into C API compliance’ for issues with the use of
non-API entry points.

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-oldrel-macos-arm64

installed package size

installed size is 28.8Mb
  sub-directories of 1Mb or more:
    libs  28.0Mb
NOTE r-oldrel-macos-x86_64

installed package size

installed size is 31.5Mb
  sub-directories of 1Mb or more:
    libs  30.7Mb

Reverse Dependencies (7)

Dependency Network

Dependencies Reverse dependencies rlang Matrix Rcpp Andromeda dplyr survival tidyr bit bit64 BrokenAdaptiveRidge CohortMethod IterativeHardThresholding SelfControlledCaseSeries EvidenceSynthesis PatientLevelPrediction EmpiricalCalibration Cyclops

Version History

new 3.7.0 Mar 10, 2026
updated 3.7.0 ← 3.6.0 diff Feb 27, 2026
updated 3.6.0 ← 3.5.2 diff Jul 17, 2025
updated 3.5.2 ← 3.5.1 diff Jun 23, 2025
updated 3.5.1 ← 3.5.0 diff Apr 10, 2025
updated 3.5.0 ← 3.4.1 diff Dec 1, 2024
updated 3.4.1 ← 3.4.0 diff Jun 5, 2024
updated 3.4.0 ← 3.3.1 diff Oct 30, 2023
updated 3.3.1 ← 3.3.0 diff Apr 10, 2023
updated 3.3.0 ← 3.2.1 diff Apr 4, 2023
updated 3.2.1 ← 3.2.0 diff Aug 9, 2022
updated 3.2.0 ← 3.1.2 diff Jun 30, 2022
updated 3.1.2 ← 3.1.1 diff Jun 16, 2021
updated 3.1.1 ← 3.1.0 diff Mar 22, 2021
updated 3.1.0 ← 3.0.0 diff Nov 4, 2020
updated 3.0.0 ← 2.0.3 diff Jun 5, 2020
updated 2.0.3 ← 2.0.2 diff Apr 10, 2020
updated 2.0.2 ← 2.0.1 diff Mar 16, 2019
updated 2.0.1 ← 2.0.0 diff Sep 22, 2018
updated 2.0.0 ← 1.3.4 diff Sep 18, 2018