CovidMutations

Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)

v0.1.3 · Sep 18, 2020 · Artistic-2.0

Description

A feasible framework for mutation analysis and reverse transcription polymerase chain reaction (RT-PCR) assay evaluation of COVID-19, including mutation profile visualization, statistics and mutation ratio of each assay. The mutation ratio is conducive to evaluating the coverage of RT-PCR assays in large-sized samples. Mercatelli, D. and Giorgi, F. M. (2020) <doi:10.20944/preprints202004.0529.v1>.

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CRAN Check Status

13 OK

Show all 13 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	OK	109.1s
r-devel-linux-x86_64-debian-gcc	OK	75.2s
r-devel-linux-x86_64-fedora-clang	OK	170.7s
r-devel-linux-x86_64-fedora-gcc	OK	154.5s
r-devel-windows-x86_64	OK	117s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	103s
r-oldrel-windows-x86_64	OK	158s
r-patched-linux-x86_64	OK	100.7s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	27s
r-release-macos-x86_64	OK	104s
r-release-windows-x86_64	OK	121s

Check History

OK 13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Jun 9, 2026

ERROR 12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE Jun 8, 2026

ERROR r-devel-linux-x86_64-debian-gcc

package dependencies

Package required but not available: ‘ggpubr’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.

OK 14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

Dependency Network

Version History

1 tracked

new 0.1.3 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Sep 18, 2020. Releases before tracking aren’t shown.