R Observatory: Metrics for ConvergeR version 0.99.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ConvergeR

0.99.1Package record

Whitfield Convergence Score and Seurat Metadata Association

0packages depend

295downloads / year

89.8%test coverage

13/13flavors OK

Overview

About

Maintained by Paul de BoissierCRAN page ↗GitHub ↗Issues ↗

Calculates the convergence score defined by Whitfield et al. 2026 doi:10.1158/0008-5472.CAN-25-4403. It allows visualization of this score alongside qualitative and quantitative Seurat object metadata via barplots and density curves, and runs appropriate statistical tests for associations.

Install

R (CRAN)pak (dev)Fedora (COPR)openSUSE (OBS)

install.packages("ConvergeR", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("pauldeboissier1/ConvergeR")

Development version from pauldeboissier1/ConvergeR. Installs pak first if it is not already available.

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ConvergeR

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ConvergeR

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 6.3 min · r-release-macos-x86_64

Status changes

OK13 OKNow
OK6 OK2026-10-11

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.99.1

READMENoVignettesYes · 1 · dynamicNEWSYes · 67% structured · does not mention 0.99.1Citation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 6
Examples that run: 100%6 run in a plain check
Exported functions with examples: 100%
Documented parameters: 100%
Return-value docs: 100%
Help pages citing references: 17%

Vignettes (1)

Introduction to ConvergeR HTML

How these are measured

Downloads

295

CRAN downloads in the past year

Rank #25,388 · ~1/day · ~25/mo

Releases R versions

Daily download trend is not available in this view yet.

29530 days

29590 days

2951 year

Compare downloads with other packages →

Also on1 autocran

How downloads are counted

Repository

pauldeboissier1/converger ↗Account: pauldeboissier1

0Stars

0Forks

0Open issues

0Open PRs

0Releases

Last activity 2026-10-08 · Default branch at 0.99.2, ahead of CRAN 0.99.1 (checked 2026-10-22)

Responsiveness

not measured

How these are measured

PracticesBeta

1 development-tooling and community-health practice detected across 1 family in the upstream repository

Checks run against github.com/pauldeboissier1/converger on 2026-10-22.

Lint, format, editor (1)

RStudio project

How this is detected·Detection ruleset v4 (2026-10-20)

Dependencies

Declared dependencies

11 external dependencies (excludes base and recommended)

Installing ConvergeR adds 135 packages (81 with compiled code, 127 MB of source tarballs). Heaviest: BH 14 MB, stringi 11 MB, ggplot2 6.0 MB.

Depends (1)

R >= 4.4.0

Imports (6)

dplyr ggplot2 magrittr scales Seurat SeuratObject

LinkingTo (0)

none

Suggests (5)

BiocStyle knitr msigdbr rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (1)

Paul de Boissier

Author, Maintainer since 0.99.1 (2026)

Releases (1)

0.99.1Latest
record
2026-10-10 · current release ·
7 days in CRAN's queue
Listed in CRAN's incoming queue from 2026-10-03 21:57 to 2026-10-10 10:19 UTC, in 29 readings.
R
R 4.6.0 released · 2026-04-24

Across CRAN, the median accepted release of the past year spent 26 hours in the queue, 90% under 11 days.How queue time is measured

Package metadata

First published: 2026-10-10
Total releases: 1 / 1 yrs
License: GPL-3 OSI
Minimum R: ≥ 4.4.0
Download size: 2.3 MB

Cite

Cite this package

Run in R for the authors' entry:

citation("ConvergeR")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ConvergeR version 0.99.1 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

Report a problem with this page →