R Observatory: Metrics for ComplexUpset version 1.3.3

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

ComplexUpset

1.3.3

Create Complex UpSet Plots Using 'ggplot2' Components

5packages depend

72.3Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Michał KrassowskiFirst published 2020-12-088 releasesCRAN page ↗GitHub ↗

UpSet plots are an improvement over Venn Diagram for set overlap visualizations. Striving to bring the best of the 'UpSetR' and 'ggplot2', this package offers a way to create complex overlap visualisations, using simple and familiar tools, i.e. geoms of 'ggplot2'. For introduction to UpSet concept, see Lex et al. (2014) doi:10.1109/TVCG.2014.2346248.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("ComplexUpset", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("krassowski/complex-upset")

Development version from krassowski/complex-upset. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-complexupset

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-ComplexUpset

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-ComplexUpset

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2NOTE11OK

Failing flavors

NOTE r-devel-linux-x86_64-debian-clang
NOTE r-devel-linux-x86_64-debian-gcc

Slowest check: 2.3 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

4

Dependencies · direct

Check history

NOTE2026-03-10
12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 568 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 95%
Return-value docs: 0%
References docs: 0%

Downloads

72.3K

CRAN downloads in the past year

Rank #1,504 · ~198/day · ~6K/mo

Releases R versions

Daily download trend is not available in this view yet.

5.3K30 days

17.9K90 days

72.3K1 year

Compare downloads with other packages →

Also on319 r2u22 autocran4.4K conda_forge

Repository

GitHub ↗ krassowski/complex-upset

569Stars

41Forks

69Open issues

7Open PRs

21Releases

354Commits

5Contributors

ggplot2upsetrupsetpatchworkvenn-diagramggplotvisualizationrstats

License MIT · 354 commits · Last activity 2025-09-23

Repository practices

Upstream repositoryBeta

2 development-tooling and community-health practices detected across 2 families in the upstream repository

Checks run against github.com/krassowski/complex-upset on 2026-08-16.

Continuous integration (1)

GitHub Actions

Governance and community (1)

Issue templates

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

13 external dependencies (excludes base and recommended)

Depends (0)

none

Imports (4)

ggplot2 patchwork scales colorspace

LinkingTo (0)

none

Suggests (9)

testthat knitr rmarkdown covr tibble ggplot2movies vdiffr jsonlite data.table

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

5direct

1indirect

SurrogateRank vennDiagramLab BCGcalc MiscMetabar genekitr

Code & Tests

People & History

People (1)

Maintainer (1)

Michał Krassowski

Author, Maintainer

Authors (1)

Michał Krassowski

Author, Maintainer

Package Timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
1.3.3Latest
2021-12-11 · current release · diff ↗
1.3.1
2021-08-05 · diff ↗
1.3.0
2021-06-06 · diff ↗
R
R 4.1.0 released · 2021-05-18
1.2.1
2021-04-29 · diff ↗
1.2.0
2021-04-04 · diff ↗
1.1.0
2021-02-26 · diff ↗
1.0.3
2021-01-10 · diff ↗
0.7.3
2020-12-08
R
R 4.0.0 released · 2020-04-24

Package metadata

First published: 2020-12-08
Total releases: 8 / 6 yrs
License: MIT + file LICENSE OSI
Download size: 4.6 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("ComplexUpset")

Format

Krassowski, M. (2021). ComplexUpset: Create Complex UpSet Plots Using 'ggplot2' Components (Version 1.3.3) [Computer software]. https://doi.org/10.32614/CRAN.package.ComplexUpset

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ComplexUpset version 1.3.3 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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