R Observatory: Metrics for CliquePercolation version 0.4.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

CliquePercolation

0.4.0Package record

Clique Percolation for Networks

1packages depend

3.7Kdownloads / year

–test coverage

11/13flavors OK

Overview

About

Maintained by Jens LangeCRAN page ↗

Clique percolation community detection for weighted and unweighted networks as well as threshold and plotting functions. For more information see Farkas et al. (2007) doi:10.1088/1367-2630/9/6/180 and Palla et al. (2005) doi:10.1038/nature03607.

Changes in 0.4.0

cpThreshold now also includes the calculation of fuzzy modularity for weighted and signed networks
added functions FuzzyMod and SignedFuzzyMod
added citation information
updated vignette

From NEWS in the release

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("CliquePercolation", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-cliquepercolation

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-CliquePercolation

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-CliquePercolation

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

2NOTE11OK

Check messages

NOTECRAN incoming feasibilityr-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Maintainer: ‘Jens Lange <lange.jens@outlook.com>’

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

CRAN check page ↗

Slowest check: 2.7 min · r-oldrel-windows-x86_64

Status changes

NOTE11 OK, 2 NOTE2026-06-09
ERROR11 OK, 1 NOTE, 1 ERROR2026-06-08
NOTE12 OK, 2 NOTE2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.4.0

READMENoVignettesYes · 1 · dynamicNEWSYes · 67% structured · mentions 0.4.0Citation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Cites a JOSS paper

Help pages: 14 (1 internal)includes a package overview page
Examples that run: 91%10 run in a plain check · 1 never run
Exported functions with examples: 100%
Documented parameters: 96%
Return-value docs: 100%
Help pages citing references: 57%

Vignettes (1)

CliquePercolation HTML

How these are measured

Downloads

3.7K

CRAN downloads in the past year

Rank #11,156 · ~10/day · ~310/mo

Releases R versions

Daily download trend is not available in this view yet.

38330 days

93690 days

3.7K1 year

Compare downloads with other packages →

Also on92 r2u9 autocran

How downloads are counted

Dependencies

Declared dependencies

10 external dependencies (excludes base and recommended)

Installing CliquePercolation adds 121 packages (68 with compiled code, 100 MB of source tarballs). Heaviest: stringi 11 MB, ggplot2 6.0 MB, data.table 5.7 MB.

Depends (1)

R >= 3.6.0

Imports (14)

colorspacegraphicsigraph magrittrMatrixmethodsPolychrome qgraphstatsutilsparallellessR ohenery pbapply

LinkingTo (0)

none

Suggests (2)

knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

1direct

0indirect

Imports 1

Depends, Imports or LinkingTo, most downloaded first

ideanet

How these are counted

Code & Tests

Datasets

People & History

People (4)

Jens Lange

Author, Maintainer since 0.2.0 (2019)

Alexander P. Christensen

Contributor · added in 0.3.0

Pedro Henrique Ribeiro Santiago

Contributor · added in 0.4.0

Janis Zickfeld

Contributor

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.4.0Latest
record
2022-11-09 · current release · diff ↗ ·
added 2 exports
FuzzyMod, SignedFuzzyMod
R
R 4.2.0 released · 2022-04-22
0.3.0
record
2021-05-29 · diff ↗
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.2.0
record
2019-10-28
R
R 3.6.0 released · 2019-04-26

Package metadata

First published: 2019-10-28
Total releases: 3 / 7 yrs
License: GPL-3 OSI
Minimum R: ≥ 3.6.0
Bundled data: 161 KB / 2 files
Download size: 1.0 MB

Cite

Cite this package

Run in R for the authors' entry:

citation("CliquePercolation")

The package provides a citation file, so citation() returns the authors' own entry.

It points to 10.21105/joss.03210.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for CliquePercolation version 0.4.0 [Data set]. HJJB, LLC. Data release v2026-10-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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