CSclone

Bayesian Nonparametric Modeling in R

v1.0 · Nov 12, 2016 · GPL (>= 2)

Description

Germline and somatic locus data which contain the total read depth and B allele read depth using Bayesian model (Dirichlet Process) to cluster. Meanwhile, the cluster model can deal with the SNVs mutation and the CNAs mutation.

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CRAN Check Status

2 NOTE

12 OK

Show all 14 flavors

Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	29.6s
r-devel-linux-x86_64-debian-gcc	NOTE	22.3s
r-devel-linux-x86_64-fedora-clang	OK	46.3s
r-devel-linux-x86_64-fedora-gcc	OK	43.7s
r-devel-macos-arm64	OK	12s
r-devel-windows-x86_64	OK	50s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	26s
r-oldrel-windows-x86_64	OK	50s
r-patched-linux-x86_64	OK	27.5s
r-release-linux-x86_64	OK	26.5s
r-release-macos-arm64	OK
r-release-macos-x86_64	OK	29s
r-release-windows-x86_64	OK	47s

Check details (2 non-OK)

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

Check History

NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

Dependency Network

Version History

new 1.0 Mar 10, 2026