CSclone

Bayesian Nonparametric Modeling in R

v1.0 · Nov 12, 2016 · GPL (>= 2)

Description

Germline and somatic locus data which contain the total read depth and B allele read depth using Bayesian model (Dirichlet Process) to cluster. Meanwhile, the cluster model can deal with the SNVs mutation and the CNAs mutation.

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2 NOTE

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Flavor	Status	Time
r-devel-linux-x86_64-debian-clang	NOTE	29.9s
r-devel-linux-x86_64-debian-gcc	NOTE	22.2s
r-devel-linux-x86_64-fedora-clang	OK	45.7s
r-devel-linux-x86_64-fedora-gcc	OK	44s
r-devel-windows-x86_64	OK	49s
r-oldrel-macos-arm64	OK
r-oldrel-macos-x86_64	OK	29s
r-oldrel-windows-x86_64	OK	47s
r-patched-linux-x86_64	OK	27.6s
r-release-linux-x86_64	OK
r-release-macos-arm64	OK	11s
r-release-macos-x86_64	OK	35s
r-release-windows-x86_64	OK	49s

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NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

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NOTE 12 OK · 2 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026

NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Peter Wu <peter123wu0@gmail.com>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: person(given = "Peter",
                    family = "Wu",
                    role = c("aut", "cre"),
                    email = "peter123wu0@gmail.com")
as necessary.

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Dependency Network

Version History

1 tracked

new 1.0 Mar 10, 2026

R Observatory began tracking this package on Mar 10, 2026; it first appeared on CRAN Nov 12, 2016. Releases before tracking aren’t shown.