R Observatory: Metrics for BayesMultiMode version 1.0.0

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

BayesMultiMode

1.0.0

Bayesian Mode Inference

0packages depend

4.5Kdownloads / year

67.3%test coverage

13/13checks pass

Overview

About

Maintained by Paul LabonneFirst published 2022-10-1210 releasesCRAN page ↗GitHub ↗

A two-step Bayesian approach for mode inference (Baştürk et al., 2026) doi:10.18637/jss.v116.i03. First, a mixture distribution is fitted on the data using a sparse finite mixture (SFM) Markov chain Monte Carlo (MCMC) algorithm. The number of mixture components does not have to be known; the size of the mixture is estimated endogenously through the SFM approach. Second, the modes of the estimated mixture at each MCMC draw are retrieved using algorithms specifically tailored for mode detection. These estimates are then used to construct posterior probabilities for the number of modes, their locations and uncertainties, providing a powerful tool for mode inference.

Install

R (CRAN)pak (dev)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("BayesMultiMode", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("paullabonne/BayesMultiMode")

Development version from paullabonne/BayesMultiMode. Installs pak first if it is not already available.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bayesmultimode

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-BayesMultiMode

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-BayesMultiMode

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

13OK

Slowest check: 3.9 min · r-oldrel-windows-x86_64

Code health

Yes

Tests · ratio 0.30

67.3%

Coverage · measured lines

100%

Documentation · exports

14

Dependencies · direct

Check history

OK2026-08-05
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
NOTE2026-08-01
12 OK · 1 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-04-25
12 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Show 1 earlier snapshots

NOTE2026-03-10
11 OK · 3 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 716 wordsVignettesNopkgdown siteNoNEWSYes · 100% structuredCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 95%
Return-value docs: 100%
References docs: 30%

Downloads

4.5K

CRAN downloads in the past year

Rank #6,646 · ~12/day · ~373/mo

Releases R versions

Daily download trend is not available in this view yet.

26730 days

1.3K90 days

4.5K1 year

Compare downloads with other packages →

Also on278 r2u42 autocran

Repository

GitHub ↗ paullabonne/bayesmultimode

2Stars

2Forks

0Open issues

0Open PRs

0Releases

363Commits

3Contributors

r-packager

License GPL-3.0 · 363 commits · Last activity 2026-05-31

Stars over time

2023-01-19 · 12026-07-07 · 2

Repository practices

Upstream repositoryBeta

5 development-tooling and community-health practices detected across 4 families in the upstream repository

Checks run against github.com/paullabonne/bayesmultimode on 2026-08-16.

Continuous integration (1)

GitHub Actions

Reproducibility and dev environment (1)

data-raw/

CRAN release process (2)

cran-comments.mdCRAN-SUBMISSION

Docs source (1)

README.Rmd

How this is detected·Detection ruleset v1 (2026-07-18)

Dependencies

Declared dependencies

15 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (14)

assertthat bayesplot dplyr ggplot2 ggpubr gtools magrittr MCMCglmm mvtnorm posterior sn stringr tidyr Rdpack

LinkingTo (0)

none

Suggests (1)

testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

Datasets

People & History

People (6)

Maintainer (1)

Paul Labonne

Author, Maintainer

Authors (6)

Author, Maintainer

Author

Author

Author

Author

Author

Package Timeline

10 releases. Pick two to compare their code metrics. R releases are shown for context.

1.0.0Latest
2026-06-01 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
0.7.5
2026-02-27 · diff ↗
0.7.4
2025-09-28 · diff ↗
R
R 4.5.0 released · 2025-04-11
0.7.3
2024-10-31 · diff ↗
0.7.2
2024-10-25 · diff ↗
R
R 4.4.0 released · 2024-04-24
0.7.1
2024-03-21 · diff ↗
0.7.0
2024-02-05 · diff ↗
0.6.0
2023-08-08 · diff ↗
R
R 4.3.0 released · 2023-04-21
0.5.1
2023-04-06 · diff ↗
0.1.1
2022-10-12
R
R 4.2.0 released · 2022-04-22

Package metadata

First published: 2022-10-12
Total releases: 10 / 4 yrs
License: GPL (>= 3) OSI
Minimum R: ≥ 3.5.0
Bundled data: 52 KB / 4 files
Download size: 4.8 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BayesMultiMode")

Format

Labonne, P., Baştürk, N., Cross, J., Hoogerheide, L., de Knijff, P., & van Dijk, H. (2026). BayesMultiMode: Bayesian Mode Inference (Version 1.0.0) [Computer software]. https://doi.org/10.32614/CRAN.package.BayesMultiMode

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BayesMultiMode version 1.0.0 [Data set]. HJJB, LLC. Data release v2026-08-18. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-18, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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