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BayesGWQS

Bayesian Grouped Weighted Quantile Sum Regression

v0.1.1 · Jan 20, 2022 · GPL-3

Description

Fits Bayesian grouped weighted quantile sum (BGWQS) regressions for one or more chemical groups with binary outcomes. Wheeler DC et al. (2019) <doi:10.1016/j.sste.2019.100286>.

Downloads

CRAN

307

Last 30 days

14302nd

853

Last 90 days

3.6K

Last year

Trend: +34.1% (30d vs prior 30d)

r2u CRAN

2

Last 30 days

31

Last 90 days

156

Last year

Trend: -81.8% (30d vs prior 30d)

autoCRAN

1

Last 7 days

25

Last 30 days

0

All-time

autoCRAN-only: this name is served only by autoCRAN, so the count is exact.

CRAN Check Status

4 NOTE
9 OK
Show all 13 flavors
Flavor Status
r-devel-linux-x86_64-debian-clang NOTE
r-devel-linux-x86_64-debian-gcc NOTE
r-devel-linux-x86_64-fedora-clang NOTE
r-devel-linux-x86_64-fedora-gcc NOTE
r-devel-windows-x86_64 OK
r-oldrel-macos-arm64 OK
r-oldrel-macos-x86_64 OK
r-oldrel-windows-x86_64 OK
r-patched-linux-x86_64 OK
r-release-linux-x86_64 OK
r-release-macos-arm64 OK
r-release-macos-x86_64 OK
r-release-windows-x86_64 OK
Check details (4 non-OK)
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘plyr’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘plyr’
  All declared Imports should be used.

Check History

NOTE 10 OK · 4 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE Mar 10, 2026
NOTE r-devel-linux-x86_64-debian-clang

CRAN incoming feasibility

Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
NOTE r-devel-linux-x86_64-debian-gcc

CRAN incoming feasibility

Maintainer: ‘Matthew Carli <carlimm@mymail.vcu.edu>’

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "David",
                      family = "Wheeler",
                      role = "aut"),
               person(given = "Matthew",
                      family = "Carli",
                      role = c("aut", "cre"),
                      email = "carlimm@mymail.vcu.edu"))
as necessary.
NOTE r-devel-linux-x86_64-fedora-clang

dependencies in R code

Namespace in Imports field not imported from: ‘plyr’
  All declared Imports should be used.
NOTE r-devel-linux-x86_64-fedora-gcc

dependencies in R code

Namespace in Imports field not imported from: ‘plyr’
  All declared Imports should be used.

Code

Structure

Lines of code

788

Files

21

Compiled share

0%

Has compiled src

No

Language breakdown

R 569 (72.2%)Tests 32 (4.1%)Docs 187 (23.7%)

API

Exported functions

4

Internal functions

5

Recent export changes

v0.1.1+1 weight.plot
v0.0.1+3 bgwqs.fit, make.X, make.x.s

Testing & CI

Has tests

Yes

Test-to-code ratio

0.06

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Return-value doc rate

100%

\dontrun example ratio

33.3%

Roxygen coverage

100%

Has pkgdown

No

NEWS present

Yes

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

50%

Unsafe pattern score

12

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.0.0

System requirements

1

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

3

First release

2020-06-12

Latest release

2022-01-20

Avg cadence

294 days

Cold removal rate

Dep drift

3

LOC over versions

v0.0.1: 496 LOCv0.0.2: 532 LOCv0.1.1: 788 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/cran-code-metrics.

Dependency Network

Dependencies Reverse dependencies coda rjags stringr plyr BayesGWQS

Version History

4 tracked
new 0.1.1 Mar 10, 2026
updated 0.1.1 ← 0.0.2 diff Jan 19, 2022
updated 0.0.2 ← 0.0.1 diff Jun 22, 2020
new 0.0.1 Jun 11, 2020