R Observatory: Metrics for BayesFBHborrow version 2.0.14

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

BayesFBHborrow

2.0.14

Bayesian Dynamic Borrowing with Flexible Baseline Hazard Function

0packages depend

3.1Kdownloads / year

–test coverage

11/13checks pass

Overview

About

Maintained by Grant IzmirlianFirst published 2024-01-118 releasesCRAN page ↗

Allows Bayesian borrowing from a historical dataset for time-to- event data. A flexible baseline hazard function is achieved via a piecewise exponential likelihood with time varying split points and smoothing prior on the historic baseline hazards. The method is described in Scott and Lewin (2026) doi:10.1093/biostatistics/kxag006, and a paper focused on the software is in Scott, Axillus, Lewin and Izmirlian (2026) doi:10.48550/arXiv.2408.04327.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("BayesFBHborrow", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bayesfbhborrow

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-BayesFBHborrow

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-BayesFBHborrow

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

2WARNING11OK

Failing flavors

WARNING r-oldrel-macos-arm64
WARNING r-release-macos-arm64

Slowest check: 4.1 min · r-oldrel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

14

Dependencies · direct

Check history

WARNING2026-07-18
11 OK · 0 NOTE · 2 WARNING · 0 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-03-10
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE

Documentation

READMEYes · 114 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 45%
Documented parameters: 100%
Return-value docs: 89%
References docs: 92%

Downloads

3.1K

CRAN downloads in the past year

Rank #9,571 · ~8/day · ~254/mo

Releases R versions

Daily download trend is not available in this view yet.

34030 days

98690 days

3.1K1 year

Compare downloads with other packages →

Also on134 r2u35 autocran

Dependencies

Declared dependencies

18 external dependencies (excludes base and recommended)

Depends (1)

R >= 4.1

Imports (14)

rlang dplyr invgamma mvtnorm checkmate magrittr ggplot2 patchwork kableExtrastatssurvivalsurvminer extraDistr bayestestR

LinkingTo (0)

none

Suggests (6)

tibble readxl testthat rmarkdown ggfortify condSURV

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Maintainer (1)

Grant Izmirlian

Author, Maintainer · added in 2.0.9

Authors (3)

Grant Izmirlian

Author, Maintainer · added in 2.0.9

Sophia Axillus

Author

Darren Scott

Author

Package Timeline

8 releases. Pick two to compare their code metrics. R releases are shown for context.

2.0.14Latest
2026-07-18 · current release · diff ↗
2.0.12
2026-07-17 · diff ↗
2.0.10
2026-06-25 · diff ↗
2.0.9
2026-06-20 · diff ↗
R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
2.0.2
2024-09-16 · diff ↗
2.0.1
2024-06-24 · diff ↗
R
R 4.4.0 released · 2024-04-24
1.0.1
2024-02-27 · diff ↗
0.0.2
2024-01-11
R
R 4.3.0 released · 2023-04-21

Package metadata

First published: 2024-01-11
Total releases: 8 / 2 yrs
License: Apache License (>= 2)
Minimum R: ≥ 4.1
Download size: 6.1 MB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BayesFBHborrow")

Format

Izmirlian, G., Axillus, S., & Scott, D. (2026). BayesFBHborrow: Bayesian Dynamic Borrowing with Flexible Baseline Hazard Function (Version 2.0.14) [Computer software]. https://doi.org/10.32614/CRAN.package.BayesFBHborrow

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BayesFBHborrow version 2.0.14 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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