R Observatory: Metrics for BMIselect version 1.0.4

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

BMIselect

1.0.4

Bayesian MI-LASSO for Variable Selection on Multiply-Imputed Datasets

0packages depend

5.6Kdownloads / year

–test coverage

12/13checks pass

Overview

About

Maintained by Jungang ZouFirst published 2025-07-094 releasesCRAN page ↗

Provides a suite of Bayesian MI-LASSO for variable selection methods for multiply-imputed datasets. The package includes four Bayesian MI-LASSO models using shrinkage (Multi-Laplace, Horseshoe, ARD) and Spike-and-Slab (Spike-and-Laplace) priors, along with tools for model fitting via MCMC, four-step projection predictive variable selection, and hyperparameter calibration. Methods are suitable for both continuous and binary covariates under missing-at-random or missing-completely-at-random assumptions. See Zou, J., Wang, S. and Chen, Q. (2025), Bayesian MI-LASSO for Variable Selection on Multiply-Imputed Data. ArXiv, 2211.00114. doi:10.48550/arXiv.2211.00114 for more details. We also provide the frequentist MI-LASSO function.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("BMIselect", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-bmiselect

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-BMIselect

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-BMIselect

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed).

Health

CRAN checks

1ERROR12OK

Failing flavors

ERROR r-oldrel-macos-arm64

Slowest check: 6.9 min · r-devel-windows-x86_64

Code health

None

Tests · ratio 0.00

not tracked

Coverage

100%

Documentation · exports

11

Dependencies · direct

Check history

ERROR2026-07-10
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-06-09
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-06-08
12 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE
OK2026-05-02
13 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-04-25
11 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Show 2 earlier snapshots

OK2026-03-30
14 OK · 0 NOTE · 0 WARNING · 0 ERROR · 0 FAILURE
ERROR2026-03-10
13 OK · 0 NOTE · 0 WARNING · 1 ERROR · 0 FAILURE

Documentation

READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo

Examples that run: 100%
Documented parameters: 99%
Return-value docs: 100%
References docs: 0%

Downloads

5.6K

CRAN downloads in the past year

Rank #7,320 · ~15/day · ~468/mo

Releases R versions

Daily download trend is not available in this view yet.

22730 days

1.2K90 days

5.6K1 year

Compare downloads with other packages →

Also on129 r2u28 autocran

Dependencies

Declared dependencies

14 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.5.0

Imports (11)

RcppMASSRfast foreach doParallel arm mice abind stringrstatsposterior

LinkingTo (2)

Rcpp RcppArmadillo

Suggests (3)

testthat knitr rmarkdown

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

Code & Tests

People & History

People (3)

Maintainer (1)

Jungang Zou

Author, Maintainer

Authors (3)

Jungang Zou

Author, Maintainer

Qixuan Chen

Author

Sijian Wang

Author

Package Timeline

4 releases. Pick two to compare their code metrics. R releases are shown for context.

1.0.4Latest
2026-07-09 · current release · diff ↗
R
R 4.6.0 released · 2026-04-24
1.0.3
2025-08-25 · diff ↗
1.0.2
2025-08-20 · diff ↗
1.0.1
2025-07-09
R
R 4.5.0 released · 2025-04-11

Package metadata

First published: 2025-07-09
Total releases: 4 / 1 yrs
License: Apache License (>= 2)
Minimum R: ≥ 3.5.0
Download size: 52 KB
Installed size: not tracked yet
With dependencies: not tracked yet

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BMIselect")

Format

Zou, J., Chen, Q., & Wang, S. (2026). BMIselect: Bayesian MI-LASSO for Variable Selection on Multiply-Imputed Datasets (Version 1.0.4) [Computer software]. https://doi.org/10.32614/CRAN.package.BMIselect

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BMIselect version 1.0.4 [Data set]. HJJB, LLC. Data release v2026-08-16. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-16, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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