R Observatory: Metrics for BIOdry version 0.9.1

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

BIOdry

0.9.1Package record

Multilevel Modeling of Dendroclimatical Fluctuations

0packages depend

3.4Kdownloads / year

–test coverage

13/13flavors OK

Overview

About

Maintained by Wilson LaraCRAN page ↗

Multilevel ecological data series (MEDS) are sequences of observations ordered according to temporal/spatial hierarchies that are defined by sample designs, with sample variability confined to ecological factors. Dendroclimatic MEDS of tree rings and climate are modeled into normalized fluctuations of tree growth and aridity. Modeled fluctuations (model frames) are compared with Mantel correlograms on multiple levels defined by sample design. Package implementation can be understood by running examples in modelFrame(), and muleMan() functions.

Install

R (CRAN)Ubuntu (r2u)Fedora (COPR)openSUSE (OBS)

install.packages("BIOdry", repos = "https://cloud.r-project.org/")

Installs the current CRAN release. Prebuilt binaries on Windows and macOS.

Release

# enable cranapt (r2u) if it is not already set up, then install
grep -rqs r2u.stat.illinois.edu /etc/apt/sources.list /etc/apt/sources.list.d/ \
  || curl -fsSL https://raw.githubusercontent.com/eddelbuettel/r2u/master/inst/scripts/add_cranapt_noble.sh | sudo bash
sudo apt install -y r-cran-biodry

Fast Ubuntu binaries via r2u (no compilation). The cranapt setup runs once and is skipped when it is already enabled. We list this channel from recorded r2u download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

bspm (used by r2u) also needs make: sudo apt install make

# enable the iucar/cran COPR if it is not already present, then install
ls /etc/yum.repos.d/*iucar*cran*.repo >/dev/null 2>&1 \
  || sudo dnf copr enable -y iucar/cran
sudo dnf install -y R-CRAN-BIOdry

RPMs from the iucar/cran COPR, rebuilt from CRAN.

For install.packages() integration in R, also: sudo dnf install R-CoprManager

# add the autoCRAN OBS repo (Tumbleweed) if it is missing, then install
zypper -q lr | grep -qi autoCRAN \
  || sudo zypper addrepo https://download.opensuse.org/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Tumbleweed/devel:languages:R:autoCRAN.repo
sudo zypper install -y R-BIOdry

RPMs auto-built from CRAN on openSUSE OBS (Tumbleweed). We list this channel from recorded autoCRAN download activity rather than from a live index of the repository, so treat it as last known rather than guaranteed.

Health

CRAN checks

13OK

CRAN check page ↗

Slowest check: 1.3 min · r-oldrel-windows-x86_64

Status changes

OK13 OK2026-08-05
NOTE12 OK, 1 NOTE2026-08-01
OK14 OK2026-03-10

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.9.1

READMENoVignettesNoNEWSYes · 100% structuredCitation fileNoWebsitenot declared in DESCRIPTION

Help pages: 29includes a package overview page
Examples that run: 100%28 run in a plain check
Exported functions with examples: 100%
Documented parameters: 93%
Return-value docs: 86%
Help pages citing references: 48%

How these are measured

Downloads

3.4K

CRAN downloads in the past year

Rank #10,704 · ~9/day · ~285/mo

Releases R versions

Daily download trend is not available in this view yet.

36830 days

97990 days

3.4K1 year

Compare downloads with other packages →

Also on126 r2u14 autocran

How downloads are counted

Dependencies

Declared dependencies

1 external dependency (excludes base and recommended)

Installing BIOdry adds 10 packages (7 with compiled code, 8.2 MB of source tarballs). Heaviest: igraph 4.8 MB, vctrs 1.0 MB, rlang 766 KB.

Depends (2)

nlmeecodist

Imports (0)

none

LinkingTo (0)

none

Suggests (0)

none

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

0indirect

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Wilson Lara

Author, Maintainer since 0.2 (2015)

Felipe Bravo

Author

Releases (9)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
R
R 4.5.0 released · 2025-04-11
0.9.1Latest
record
2025-04-03 · current release · diff ↗
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
0.9
record
2022-05-02 · diff ↗
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
0.8
record
2020-03-09 · diff ↗
0.7
record
2019-12-12 · diff ↗
0.6
record
2019-05-28 · diff ↗
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
0.5
record
2017-04-20 · diff ↗ ·
removed 2 exports
colclass, splitFrame

added 8 exports
anova.modelFrame, cClass, mUnits, plot.modelFrame, plot.muleMan, plot.wlai, summary.modelFrame, slitFrame

Show 5 earlier eventsHide 5 earlier events

0.4
record
2017-01-17 · diff ↗ ·
removed 1 export
ringLme

added 1 export
frametoLme
R
R 3.3.0 released · 2016-05-03
0.3
record
2016-02-10 · diff ↗
0.2
record
2015-12-30
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-12-30
Total releases: 9 / 11 yrs
License: GPL-3 OSI
Bundled data: 17 KB / 6 files
Download size: 58 KB

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("BIOdry")

Format

Lara, W., & Bravo, F. (2025). BIOdry: Multilevel Modeling of Dendroclimatical Fluctuations (Version 0.9.1) [Computer software]. https://doi.org/10.32614/CRAN.package.BIOdry

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for BIOdry version 0.9.1 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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