R Observatory: Metrics for ADPclust version 0.7

Balamuta, James Joseph

doi:10.5281/zenodo.21843040

This package was removed from CRAN on 2026-02-24. Its history is shown below.

Reason: issues were not corrected despite reminders

Details below reflect version 0.7, its last release before removal.

ADPclust

0.7Package record

Fast Clustering Using Adaptive Density Peak Detection

0packages depend

–downloads / year

–test coverage

–flavors OK

Overview

About

Maintained by Yifan (Ethan) XuCRAN page ↗GitHub ↗

An implementation of ADPclust clustering procedures (Fast Clustering Using Adaptive Density Peak Detection). The work is built and improved upon the idea of Rodriguez and Laio (2014)DOI:10.1126/science.1242072. ADPclust clusters data by finding density peaks in a density-distance plot generated from local multivariate Gaussian density estimation. It includes an automatic centroids selection and parameter optimization algorithm, which finds the number of clusters and cluster centroids by comparing average silhouettes on a grid of testing clustering results; It also includes a user interactive algorithm that allows the user to manually selects cluster centroids from a two dimensional "density-distance plot". Here is the research article associated with this package: "Wang, Xiao-Feng, and Yifan Xu (2015)DOI:10.1177/0962280215609948 Fast clustering using adaptive density peak detection." Statistical methods in medical research". url: http://smm.sagepub.com/content/early/2015/10/15/0962280215609948.abstract.

Install

R (source archive)pak (dev)

url <- "https://cran.r-project.org/src/contrib/Archive/ADPclust/ADPclust_0.7.tar.gz"
pkgFile <- "ADPclust_0.7.tar.gz"
download.file(url, pkgFile)
install.packages(pkgFile, type = "source", repos = NULL)

This package is no longer on CRAN, so install.packages() cannot fetch it by name. This downloads the last archived source (0.7) and builds it locally. Install its dependencies first, and note that building from source needs the usual compiler toolchain.

if (!requireNamespace("pak", quietly = TRUE))
  install.packages("pak", repos = "https://cloud.r-project.org/")
pak::pak("ethanyxu/ADPclust")

Development version from ethanyxu/ADPclust. Installs pak first if it is not already available.

Health

CRAN checks

CRAN check results are not tracked yet.

Advisories

none known

How this is measured·How advisories are found

Documentation

In release 0.7

READMEYes · 151 wordsVignettesYes · 1 · dynamicNEWSNoCitation fileYes · cites a publicationWebsitenot declared in DESCRIPTION

Help pages: 19
Examples that run: 100%3 run in a plain check
Exported functions with examples: 22%
Documented parameters: 97%
Return-value docs: 100%
Help pages citing references: 5%

How these are measured

Downloads

Releases R versions

Daily download trend is not available in this view yet.

Compare downloads with other packages →

Also on126 r2u25 autocran177 c2d4u

How downloads are counted

Dependencies

Declared dependencies

5 external dependencies (excludes base and recommended)

Depends (1)

R >= 3.0.0

Imports (4)

dplyrclusterfields knitr

LinkingTo (0)

none

Suggests (2)

rmarkdown testthat

Enhances (0)

none

Dependency license breakdown →

Reverse dependencies

0direct

–indirect (not tracked)

Nothing depends on this yet.

How these are counted

Code & Tests

Datasets

People & History

People (2)

Yifan (Ethan) Xu

Author, Maintainer · added in 0.7

Xiao-Feng Wang

Author

Maintainer since 0.6.3 (2015)

Listed in earlier versions (2)

Yifan "Ethan" Xu

no longer listed · 0.6.3

Yifan \

no longer listed · 0.6.5

Releases (3)

Pick two releases to compare their code metrics.

R
R 4.6.0 released · 2026-04-24
archivedRemoved from CRAN
2026-02-24
issues were not corrected despite reminders
R
R 4.5.0 released · 2025-04-11
R
R 4.4.0 released · 2024-04-24
R
R 4.3.0 released · 2023-04-21
R
R 4.2.0 released · 2022-04-22
R
R 4.1.0 released · 2021-05-18
R
R 4.0.0 released · 2020-04-24
R
R 3.6.0 released · 2019-04-26
R
R 3.5.0 released · 2018-04-23
R
R 3.4.0 released · 2017-04-21
0.7
record
2016-10-15 · diff ↗ ·
added 6 exports
FindCentersAutoV, FindClustersAuto, FindClustersGivenCenters, FindClustersManual, FindDistm, FindFD
R
R 3.3.0 released · 2016-05-03
0.6.5
record
2015-12-03 · diff ↗
0.6.3
record
2015-04-20
R
R 3.2.0 released · 2015-04-16

Package metadata

First published: 2015-04-20
Total releases: 3 / 11 yrs
License: GPL (>= 2) OSI
Minimum R: ≥ 3.0.0
Bundled data: 139 KB / 5 files

Cite

Cite this package

Run in R for the authors' entry:

citation("ADPclust")

The package provides a citation file, so citation() returns the authors' own entry.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

Format

APA

Balamuta, J. J. (2026). R Observatory: Metrics for ADPclust version 0.7 [Data set]. HJJB, LLC. Data release v2026-10-21. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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