zikv_tree_reduced
Phylogenetic tree of Zika virus polyprotein
Bundled with sitePath · exported, loads via data()
Class
phylo
Elements
4
Missing
0
Format
rda · none
version 3 · 7.8 KB
File
data/zikv_tree_reduced.rda
Fingerprint
0b3bb75d
Format documented
Yes
Source
Source not stated
About this object
A phylogenetic tree. Topology is in an edge matrix of parent-child pairs, with branch lengths, tip labels, and an edge-ordering attribute. R object catalogue
Structure
Distinct
4
Element length
1 – 638
Total length
1,119
Elements
Element
Type
Distinct
Missing
Summary
edgeinteger32001 – 320·319 × 2 matrixmean 200.6
Min.
1
1st Qu.
160.25
Median
214
Mean
200.624
3rd Qu.
267
Max.
320
Std. dev
83.4325
Skewness
-0.6674
Kurtosis
-0.4418
edge.lengthnumeric10801.0e-6 – 0.009mean 0.0003
Min.
1.0e-6
1st Qu.
1.0e-6
Median
1.0e-6
Mean
0.0003
3rd Qu.
0.0003
Max.
0.009
Std. dev
0.0007
Skewness
7.338
Kurtosis
80.84
Outliers
360 low · 36 high
Nnode
integer
1
0
159
tip.label
character
161
0
8 characters
Declared attributes
Other attributes
Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.
| Attribute | Holds | Length | Value |
|---|---|---|---|
| order | character | 1 | cladewise |
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.22 | 2025-10-29 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.21 | 2025-09-18 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.20 | 2024-10-29 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.19 | 2024-04-30 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.18 | 2023-10-24 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.17 | 2023-04-25 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.16 | 2022-11-01 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.15 | 2022-04-26 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.14 | 2022-01-26 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.13 | 2021-09-16 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.12 | 2021-04-27 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.11 | 2020-06-11 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.10 | 2020-04-01 | 4 elements | Unchanged | rda · none version 3 · 7.8 KB | exact |
| 3.9 | 2019-06-25 | 4 elements | – | rda · none version 3 · 7.8 KB | exact |