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AAGeom

Geometrical Descriptors for 20 Amino Acids calculated by Dragon

Bundled with protr · exported, loads via data()

Class
data.frame
Dimensions
20 × 41
Missing
0
Format
rda · gzip
version 2 · 3.5 KB
File
data/AAGeom.rda
Fingerprint
3814eb58
Source
Source not stated
About this object
A table with named columnsA bordered table: a header band ruled off from the body with an empty slot over each column where its name goes, and rows of cells under it that share every edge. Nothing is in any of them.

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes
Row names
Yes
Columns
Column
Type
Distinct
Missing
Summary
W3D
numeric
20
0
110.81 – 1484.3mean 651.3
Min.
110.81
1st Qu.
394.99
Median
620.216
Mean
651.342
3rd Qu.
813.996
Max.
1484.3
Std. dev
380.591
Skewness
0.6305
Kurtosis
-0.6225
Outliers
10 low · 1 high
J3D
numeric
20
0
2.526 – 6.872mean 5.05
Min.
2.526
1st Qu.
3.818
Median
5.3325
Mean
5.0499
3rd Qu.
5.9622
Max.
6.872
Std. dev
1.3187
Skewness
-0.41
Kurtosis
-1.247
H3D
numeric
20
0
21.545 – 106.741mean 65.49
Min.
21.545
1st Qu.
50.8305
Median
66.363
Mean
65.4877
3rd Qu.
83.9523
Max.
106.741
Std. dev
23.5527
Skewness
-0.0078
Kurtosis
-1.073
AGDD
numeric
20
0
22.162 – 109.948mean 62.6
Min.
22.162
1st Qu.
47.2155
Median
63.5495
Mean
62.5981
3rd Qu.
73.0595
Max.
109.948
Std. dev
23.9171
Skewness
0.3341
Kurtosis
-0.8519
DDI
numeric
20
0
45.459 – 358.134mean 182.4
Min.
45.459
1st Qu.
129.275
Median
178.575
Mean
182.385
3rd Qu.
230.65
Max.
358.134
Std. dev
82.5796
Skewness
0.3423
Kurtosis
-0.8075
ADDD
numeric
20
0
9.092 – 26.528mean 18.02
Min.
9.092
1st Qu.
15.4317
Median
18.3055
Mean
18.0196
3rd Qu.
20.7192
Max.
26.528
Std. dev
4.4011
Skewness
-0.0506
Kurtosis
-0.7526
G1
numeric
20
0
4.683 – 19.52mean 10.9
Min.
4.683
1st Qu.
9.0013
Median
10.671
Mean
10.8986
3rd Qu.
12.2255
Max.
19.52
Std. dev
3.4447
Skewness
0.5395
Kurtosis
0.1294
Outliers
10 low · 1 high
G2
numeric
20
0
3.045 – 9.731mean 5.829
Min.
3.045
1st Qu.
4.816
Median
5.6935
Mean
5.8288
3rd Qu.
6.5287
Max.
9.731
Std. dev
1.6037
Skewness
0.5174
Kurtosis
-0.147
Outliers
10 low · 1 high
RGyr
numeric
20
0
1.523 – 3.003mean 2.254
Min.
1.523
1st Qu.
1.917
Median
2.156
Mean
2.2544
3rd Qu.
2.5042
Max.
3.003
Std. dev
0.4312
Skewness
0.2144
Kurtosis
-1.112
SPAN
numeric
20
0
2.344 – 5.695mean 3.793
Min.
2.344
1st Qu.
3.08
Median
3.6545
Mean
3.7934
3rd Qu.
4.3678
Max.
5.695
Std. dev
0.8888
Skewness
0.3603
Kurtosis
-0.8486
SPAM
numeric
16
0
0.403 – 0.487mean 0.4458
Min.
0.403
1st Qu.
0.4258
Median
0.443
Mean
0.4458
3rd Qu.
0.4665
Max.
0.487
Std. dev
0.0242
Skewness
0.0011
Kurtosis
-1.223
MEcc
numeric
12
0
0.963 – 1mean 0.9902
Min.
0.963
1st Qu.
0.9882
Median
0.993
Mean
0.9902
3rd Qu.
0.996
Max.
1
Std. dev
0.0096
Skewness
-1.268
Kurtosis
0.9707
Outliers
22 low · 0 high
SPH
numeric
20
0
0.381 – 0.833mean 0.6496
Min.
0.381
1st Qu.
0.5795
Median
0.651
Mean
0.6496
3rd Qu.
0.7555
Max.
0.833
Std. dev
0.1246
Skewness
-0.3935
Kurtosis
-0.8737
ASP
numeric
19
0
0.121 – 0.702mean 0.3231
Min.
0.121
1st Qu.
0.2195
Median
0.3305
Mean
0.3231
3rd Qu.
0.385
Max.
0.702
Std. dev
0.1417
Skewness
0.7044
Kurtosis
0.39
Outliers
10 low · 1 high
FDI
numeric
18
0
0.913 – 0.989mean 0.945
Min.
0.913
1st Qu.
0.9308
Median
0.945
Mean
0.945
3rd Qu.
0.9592
Max.
0.989
Std. dev
0.0199
Skewness
0.2689
Kurtosis
-0.8806
PJI3
numeric
20
0
0.441 – 0.921mean 0.6597
Min.
0.441
1st Qu.
0.5578
Median
0.6625
Mean
0.6597
3rd Qu.
0.7335
Max.
0.921
Std. dev
0.1331
Skewness
0.1223
Kurtosis
-0.9543
L.Bw
numeric
20
0
1.44 – 9.98mean 3.497
Min.
1.44
1st Qu.
2.2175
Median
2.935
Mean
3.4965
3rd Qu.
4.225
Max.
9.98
Std. dev
1.9532
Skewness
1.744
Kurtosis
3.355
Outliers
10 low · 1 high
SEig
numeric
20
0
18.348 – 55.769mean 37.31
Min.
18.348
1st Qu.
31.9157
Median
37.5665
Mean
37.3053
3rd Qu.
43.3227
Max.
55.769
Std. dev
9.5129
Skewness
-0.0376
Kurtosis
-0.7972
HOMA
numeric
5
0
0 – 0.976mean 0.1877
Min.
0
1st Qu.
0
Median
0
Mean
0.1877
3rd Qu.
0
Max.
0.976
Std. dev
0.3855
Skewness
1.396
Kurtosis
-0.0366
Zeros
16
RCI
numeric
5
0
0 – 1.433mean 0.2808
Min.
0
1st Qu.
0
Median
0
Mean
0.2808
3rd Qu.
0
Max.
1.433
Std. dev
0.5763
Skewness
1.39
Kurtosis
-0.0631
Zeros
16
AROM
numeric
5
0
0 – 0.993mean 0.1948
Min.
0
1st Qu.
0
Median
0
Mean
0.1948
3rd Qu.
0
Max.
0.993
Std. dev
0.3997
Skewness
1.391
Kurtosis
-0.0597
Zeros
16
HOMT
numeric
5
0
0 – 8.954mean 1.26
Min.
0
1st Qu.
0
Median
0
Mean
1.2601
3rd Qu.
0
Max.
8.954
Std. dev
2.6906
Skewness
1.675
Kurtosis
1.34
Zeros
16
DISPm
numeric
20
0
2.48 – 9.642mean 6.774
Min.
2.48
1st Qu.
5.3205
Median
7.2235
Mean
6.7735
3rd Qu.
8.3287
Max.
9.642
Std. dev
2.0934
Skewness
-0.3239
Kurtosis
-1.081
QXXm
numeric
20
0
4.338 – 39.403mean 19.31
Min.
4.338
1st Qu.
14.5152
Median
19.561
Mean
19.3124
3rd Qu.
22.5128
Max.
39.403
Std. dev
7.638
Skewness
0.4328
Kurtosis
0.5893
Outliers
10 low · 1 high
QYYm
numeric
20
0
11.205 – 112.274mean 52.34
Min.
11.205
1st Qu.
27.534
Median
40.971
Mean
52.3382
3rd Qu.
66.3745
Max.
112.274
Std. dev
32.1646
Skewness
0.5829
Kurtosis
-1.068
QZZm
numeric
20
0
15.054 – 129.074mean 60.78
Min.
15.054
1st Qu.
33.9535
Median
48.2695
Mean
60.7835
3rd Qu.
72.5773
Max.
129.074
Std. dev
34.7763
Skewness
0.6752
Kurtosis
-0.8136
DISPv
numeric
20
0
0.813 – 7.53mean 3.066
Min.
0.813
1st Qu.
1.7245
Median
2.6245
Mean
3.0663
3rd Qu.
3.4703
Max.
7.53
Std. dev
1.9323
Skewness
1.014
Kurtosis
-0.0719
Outliers
20 low · 2 high
QXXv
numeric
20
0
3.948 – 40.755mean 19.02
Min.
3.948
1st Qu.
13.2148
Median
17.4785
Mean
19.0189
3rd Qu.
24.7142
Max.
40.755
Std. dev
8.2256
Skewness
0.6082
Kurtosis
0.3852
QYYv
numeric
20
0
9.676 – 114.29mean 47.58
Min.
9.676
1st Qu.
25.0125
Median
41.1445
Mean
47.5774
3rd Qu.
59.0827
Max.
114.29
Std. dev
31.5999
Skewness
0.7425
Kurtosis
-0.7764
Outliers
10 low · 1 high
QZZv
numeric
20
0
11.886 – 136.192mean 55.3
Min.
11.886
1st Qu.
30.9947
Median
48.6495
Mean
55.2976
3rd Qu.
69.0217
Max.
136.192
Std. dev
34.7814
Skewness
0.8497
Kurtosis
-0.4194
Outliers
10 low · 1 high
DISPe
numeric
18
0
0.172 – 0.417mean 0.3115
Min.
0.172
1st Qu.
0.288
Median
0.322
Mean
0.3115
3rd Qu.
0.3422
Max.
0.417
Std. dev
0.0561
Skewness
-0.5652
Kurtosis
0.2584
Outliers
11 low · 0 high
QXXe
numeric
20
0
10.645 – 86.474mean 46
Min.
10.645
1st Qu.
32.4877
Median
44.5635
Mean
45.9987
3rd Qu.
60.3145
Max.
86.474
Std. dev
17.5618
Skewness
0.1702
Kurtosis
-0.2788
QYYe
numeric
20
0
24.693 – 222.968mean 100.4
Min.
24.693
1st Qu.
57.0027
Median
91.7975
Mean
100.407
3rd Qu.
123.516
Max.
222.968
Std. dev
61.5491
Skewness
0.7234
Kurtosis
-0.7855
QZZe
numeric
20
0
29.863 – 257.684mean 118.4
Min.
29.863
1st Qu.
70.941
Median
108.155
Mean
118.354
3rd Qu.
136.071
Max.
257.684
Std. dev
67.4196
Skewness
0.795
Kurtosis
-0.5397
Outliers
20 low · 2 high
DISPp
numeric
20
0
0.035 – 0.961mean 0.2222
Min.
0.035
1st Qu.
0.0488
Median
0.115
Mean
0.2222
3rd Qu.
0.3442
Max.
0.961
Std. dev
0.2517
Skewness
1.482
Kurtosis
1.305
Outliers
10 low · 1 high
QXXp
numeric
20
0
4.413 – 44.335mean 21.12
Min.
4.413
1st Qu.
14.7602
Median
19.162
Mean
21.1191
3rd Qu.
27.8788
Max.
44.335
Std. dev
9.0279
Skewness
0.5216
Kurtosis
0.1706
QYYp
numeric
20
0
10.52 – 122.401mean 51.13
Min.
10.52
1st Qu.
27.4617
Median
45.205
Mean
51.1277
3rd Qu.
63.6388
Max.
122.401
Std. dev
33.4177
Skewness
0.7493
Kurtosis
-0.7495
Outliers
10 low · 1 high
QZZp
numeric
20
0
12.72 – 145.844mean 59.44
Min.
12.72
1st Qu.
34.4922
Median
52.51
Mean
59.4384
3rd Qu.
72.9458
Max.
145.844
Std. dev
36.8861
Skewness
0.8526
Kurtosis
-0.3866
Outliers
10 low · 1 high
G.N..N.
numeric
7
0
0 – 19.958mean 2.634
Min.
0
1st Qu.
0
Median
0
Mean
2.6344
3rd Qu.
4.5622
Max.
19.958
Std. dev
5.1165
Skewness
2.08
Kurtosis
3.946
Zeros
14
Outliers
10 low · 1 high
G.N..O.
numeric
20
0
6.24 – 43.757mean 13.76
Min.
6.24
1st Qu.
6.4458
Median
10.167
Mean
13.7617
3rd Qu.
18.0428
Max.
43.757
Std. dev
9.5944
Skewness
1.486
Kurtosis
2.094
Outliers
10 low · 1 high
G.O..O.
numeric
8
0
0 – 22.532mean 4.264
Min.
0
1st Qu.
0
Median
0
Mean
4.2645
3rd Qu.
7.2542
Max.
22.532
Std. dev
6.8243
Skewness
1.304
Kurtosis
0.4892
Zeros
13
Outliers
10 low · 1 high
The same data in 2 other packages

This data is identical to the data these packages carry, down to the byte.

BioMedRRcpiBioconductor

The structure fingerprint found nothing beyond this list.

Version history
VersionReleasedSizeChangeStored asConfidence
3.0.32014-01-2520 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-52025-08-2120 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-42024-09-1120 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-32024-08-3020 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-22024-07-2120 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-12024-04-2020 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.7-02023-10-3020 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.6-32023-03-0520 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.6-22019-05-1820 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.6-12019-02-2420 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.6-02019-02-1120 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.5-22018-11-2220 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.5-12018-07-1320 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.5-02017-11-1820 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.4-22017-09-2920 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.4-12017-07-0920 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.4-02017-06-0620 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.3-02017-05-0820 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.2-12016-12-3020 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.2-02016-11-1220 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.1-12015-12-2920 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
1.0-12015-11-2720 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
0.5-12014-12-2420 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
0.4-12014-10-1020 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
0.3-12014-08-2420 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
0.2-12014-01-2520 × 41Unchangedrda · gzip
version 2 · 3.5 KB
exact
0.2-02013-12-1920 × 41–rda · gzip
version 2 · 3.5 KB
exact

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