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peerj32

Probiotics Intervention Data

Bundled with microbiome · exported, loads via data()

Class
list
Elements
4
Missing
0
Format
rda · xz
version 3 · 87 KB
File
data/peerj32.rda
Fingerprint
f330d2ed
Format documented
Yes
Source
Source not stated
About this object
A list with no shape constraintsRows of cells of visibly different widths, one below the next, with nothing lining them up and nothing in them, and under them a small block with a header band: an element of a list can be another structure. There is no common length, so there is no row count.list

R's general-purpose container. Elements can be any type and any size. R object catalogue

Structure
Distinct
4
Nesting depth
2
Element length
0 – 17,116
Total length
22,841
Nested rows
44
Nested columns
5
Elements
Element
Type
Distinct
Missing
Summary
lipids
numeric
2,611
0
-1.699 – 2.54·44 × 389 matrixmean 0.2414
Min.
-1.699
1st Qu.
-0.2518
Median
0.1732
Mean
0.2414
3rd Qu.
0.6522
Max.
2.54
Std. dev
0.6406
Skewness
0.4911
Kurtosis
-0.276
Zeros
51
Outliers
771 low · 76 high
microbes
numeric
5,720
0
49.8869 – 9797.45·44 × 130 matrixmean 266.1
Min.
49.8869
1st Qu.
64.9021
Median
91.8366
Mean
266.144
3rd Qu.
258.068
Max.
9797.45
Std. dev
477.949
Skewness
5.753
Kurtosis
55.22
Outliers
6820 low · 682 high
meta
list
5
0
nested·44 rows nested
Element length
44 – 44
Total length
220
Nested rows
44
What is inside it
Element
Type
Distinct
Missing
Summary
time
numeric
2
0
1 – 2mean 1.5
Min.
1
1st Qu.
1
Median
1.5
Mean
1.5
3rd Qu.
2
Max.
2
Std. dev
0.5058
Skewness
-2.523e-17
Kurtosis
-2.045
gender
character
2
0
1 characters
subject
factor
22
0
S12S102S112S122S132S142+16 more
Levels
22
Used
22
Rows per level
S12S102S112S122S132S142S152S162S172S182S192S22S202S212S222S32S42S52S62S72S82S92
sample
character
44
0
8 – 9 characters
group
factor
2
0
Placebo28LGG16
phyloseq
phyloseq
–
–
empty
Every nested table has these 5 columns
  • time
  • gender
  • subject
  • sample
  • group
Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-284 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.222025-10-294 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.212025-04-154 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.202024-10-294 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.192024-04-304 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.182023-10-244 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.172023-04-254 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.162022-11-014 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.152022-04-264 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.142021-10-264 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.132021-05-194 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.122020-10-274 elementsUnchangedrda · xz
version 3 · 87 KB
exact
3.112020-04-274 elementsRepackagedrda · xz
version 3 · 87 KB
exact
3.102019-10-294 elementsUnchangedrda · gzip
version 2 · 113 KB
exact
3.92019-05-024 elementsUnchangedrda · gzip
version 2 · 113 KB
exact
3.82018-11-304 elementsUnchangedrda · gzip
version 2 · 112 KB
exact
3.72018-05-234 elementsUnchangedrda · gzip
version 2 · 112 KB
exact
3.62018-02-224 elements–rda · gzip
version 2 · 112 KB
exact

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