exampleData
PGC GWAS Dataset and Annotation Dataset
Bundled with gpaExample · exported, loads via data()
Class
list
Elements
2
Missing
0
Format
rda · xz
version 3 · 12 MB
File
data/exampleData.RData
Fingerprint
5a78a9f1
Format documented
Yes
Source
Cross-Disorder Group of the Psychiatric Genomics Consortium (2013a), "Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs", *Nature Genetics*, 45:984--994. Cross-Disorder Group of the Psychiatric Genomics Consortium (2013b), "Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis", *Lancet*, 381:1371--1379. Lee SH, DeCandia TR, Ripke S, Yang J, Sullivan PF, et al. (2012), "Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs", *Nature Genetics*, 44:247--250. Raychaudhuri S, Korn JM, McCarroll SA, Altshuler D, Sklar P, et al. (2010), "Accurately assessing the risk of schizophrenia conferred by rare copy-number variation affecting genes with brain function", *PLoS Genetics*, 6:e1001097.
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
2
Element length
1,219,805 – 6,099,025
Total length
7,318,830
Elements
Element
Type
Distinct
Missing
Summary
pvalnumeric35,09402.2e-10 – 1·1,219,805 × 5 matrixmean 0.4889
Min.
2.2e-10
1st Qu.
0.2326
Median
0.4856
Mean
0.4889
3rd Qu.
0.7422
Max.
1
Std. dev
0.2923
Skewness
0.0324
Kurtosis
-1.216
anninteger200 – 1·1,219,805 × 1 matrixmean 0.219
Min.
0
1st Qu.
0
Median
0
Mean
0.219
3rd Qu.
0
Max.
1
Std. dev
0.4136
Skewness
1.359
Kurtosis
-0.1539
Zeros
952,636
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.22 | 2025-10-29 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.21 | 2025-04-15 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.20 | 2024-10-29 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.19 | 2024-04-30 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.18 | 2023-10-24 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.17 | 2023-04-25 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.16 | 2022-11-01 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.15 | 2022-04-26 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.14 | 2021-10-26 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.13 | 2021-05-19 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.12 | 2020-10-27 | 2 elements | Unchanged | rda · xz version 3 · 12 MB | exact |
| 3.11 | 2020-04-27 | 2 elements | – | rda · xz version 3 · 12 MB | exact |